RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ESRRAP11474 423 aaPredicted RBP10.38□□□□□ -0.75
RFC1-214ENST00000512726 CABP4P57796 275 aa10.38□□□□□ -0.75
RFC1-214ENST00000512726 AP3B2Q13367 1082 aa10.38□□□□□ -0.75
RFC1-214ENST00000512726 ELMSAN1Q6PJG2 1045 aa10.38□□□□□ -0.75
RFC1-214ENST00000512726 GAL3ST3Q96A11 431 aa10.38□□□□□ -0.75
RFC1-214ENST00000512726 PCDHB14Q9Y5E9 798 aa10.38□□□□□ -0.75
RFC1-214ENST00000512726 RAB11FIP3O75154 756 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 ATE1O95260 518 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 ZNF252P-AS1Q0IIN9 211 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 IKBKEQ14164 716 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 ARSHQ5FYA8 562 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 KANK3Q6NY19 840 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 C19orf47Q8N9M1 422 aaKnown RBP10.37□□□□□ -0.75
RFC1-214ENST00000512726 LACRTQ9GZZ8 138 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 SMG9Q9H0W8 520 aaKnown RBP10.37□□□□□ -0.75
RFC1-214ENST00000512726 TNKS2Q9H2K2 1166 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 SLC6A14Q9UN76 642 aa10.37□□□□□ -0.75
RFC1-214ENST00000512726 LRRFIP1Q32MZ4 808 aaKnown RBP10.36□□□□□ -0.75
RFC1-214ENST00000512726 MTERF2Q49AM1 385 aa10.36□□□□□ -0.75
RFC1-214ENST00000512726 PERM1Q5SV97 790 aa10.36□□□□□ -0.75
RFC1-214ENST00000512726 TNFRSF25Q93038 417 aa10.36□□□□□ -0.75
RFC1-214ENST00000512726 KIFC2Q96AC6 838 aa10.36□□□□□ -0.75
RFC1-214ENST00000512726 KANSL2Q9H9L4 492 aa10.36□□□□□ -0.75
RFC1-214ENST00000512726 ESYT3A0FGR9 886 aa10.35□□□□□ -0.75
RFC1-214ENST00000512726 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
RFC1-214ENST00000512726 BMP4P12644 408 aa10.35□□□□□ -0.75
RFC1-214ENST00000512726 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
RFC1-214ENST00000512726 AVENQ9NQS1 362 aaPredicted RBP10.35□□□□□ -0.75
RFC1-214ENST00000512726 TRIM33Q9UPN9 1127 aa10.35□□□□□ -0.75
RFC1-214ENST00000512726 POLR3KQ9Y2Y1 108 aaPredicted RBP10.35□□□□□ -0.75
RFC1-214ENST00000512726 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
RFC1-214ENST00000512726 DDAH1O94760 285 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 GJB6O95452 261 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 CDC27P30260 824 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 PCBP4P57723 403 aaKnown RBP10.34□□□□□ -0.75
RFC1-214ENST00000512726 PTPN11Q06124 597 aaPredicted RBP10.34□□□□□ -0.75
RFC1-214ENST00000512726 MAP1SQ66K74 1059 aaPredicted RBP10.34□□□□□ -0.75
RFC1-214ENST00000512726 PDZD3Q86UT5 571 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 CACTIN-AS1Q8N1I8 211 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 METTL14Q9HCE5 456 aaKnown RBP10.34□□□□□ -0.75
RFC1-214ENST00000512726 PCDH12Q9NPG4 1184 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 TMEM260Q9NX78 707 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 FRRS1LQ9P0K9 344 aa10.34□□□□□ -0.75
RFC1-214ENST00000512726 GRIN3BO60391 1043 aa10.33□□□□□ -0.76
RFC1-214ENST00000512726 GSTP1P09211 210 aaKnown RBP10.33□□□□□ -0.76
RFC1-214ENST00000512726 ADAMTSL4Q6UY14 1074 aa10.33□□□□□ -0.76
RFC1-214ENST00000512726 C16orf86Q6ZW13 317 aa10.33□□□□□ -0.76
RFC1-214ENST00000512726 MICAL1Q8TDZ2 1067 aa10.33□□□□□ -0.76
RFC1-214ENST00000512726 THAP3Q8WTV1 239 aaPredicted RBP10.33□□□□□ -0.76
RFC1-214ENST00000512726 SH2B1Q9NRF2 756 aaPredicted RBP10.33□□□□□ -0.76
RFC1-214ENST00000512726 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
RFC1-214ENST00000512726 GPR25O00155 361 aa10.32□□□□□ -0.76
RFC1-214ENST00000512726 ST8SIA5O15466 376 aa10.32□□□□□ -0.76
RFC1-214ENST00000512726 ADH7P40394 386 aa10.32□□□□□ -0.76
RFC1-214ENST00000512726 MLECQ14165 292 aa10.32□□□□□ -0.76
RFC1-214ENST00000512726 C2orf27AQ580R0 203 aa10.32□□□□□ -0.76
RFC1-214ENST00000512726 KIAA0907Q7Z7F0 614 aaPredicted RBP10.32□□□□□ -0.76
RFC1-214ENST00000512726 TM9SF2Q99805 663 aa10.32□□□□□ -0.76
RFC1-214ENST00000512726 A0A1W2PQH9 124 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 CDC14CA4D256 554 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 GFRA3O60609 400 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 RUFY4Q6ZNE9 571 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 TTC6Q86TZ1 520 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 TTC9Q92623 222 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 ACSBG1Q96GR2 724 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 FEZ1Q99689 392 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 SOX17Q9H6I2 414 aaPredicted RBP10.31□□□□□ -0.76
RFC1-214ENST00000512726 NAGPAQ9UK23 515 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 SLC12A7Q9Y666 1083 aa10.31□□□□□ -0.76
RFC1-214ENST00000512726 MEIS3P2A8K0S8 358 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 ADARB2-AS1A8MUL3 147 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 H3BRJ5 948 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 SOX1O00570 391 aaPredicted RBP10.3□□□□□ -0.76
RFC1-214ENST00000512726 C2CD2LO14523 706 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 MARCH6O60337 910 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 GUCY2CP25092 1073 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 GYS2P54840 703 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
RFC1-214ENST00000512726 SQSTM1Q13501 440 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 GDF6Q6KF10 455 aaPredicted RBP10.3□□□□□ -0.76
RFC1-214ENST00000512726 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.3□□□□□ -0.76
RFC1-214ENST00000512726 ST13P5Q8NFI4 369 aaPredicted RBP10.3□□□□□ -0.76
RFC1-214ENST00000512726 ZNF669Q96BR6 464 aaPredicted RBP10.3□□□□□ -0.76
RFC1-214ENST00000512726 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
RFC1-214ENST00000512726 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 LEMD3Q9Y2U8 911 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 KDM2BQ8NHM5 1336 aa10.3□□□□□ -0.76
RFC1-214ENST00000512726 EPHA1P21709 976 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 ADH6P28332 368 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 GSTM4Q03013 218 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 C6orf15Q6UXA7 325 aaPredicted RBP10.29□□□□□ -0.76
RFC1-214ENST00000512726 SV2AQ7L0J3 742 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 FAM178BQ8IXR5 827 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 ZSCAN1Q8NBB4 408 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 TMEM40Q8WWA1 233 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 CACNA2D2Q9NY47 1150 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 PRR36Q9H6K5 1346 aa10.29□□□□□ -0.76
RFC1-214ENST00000512726 HTR3BO95264 441 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms