RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 EYA3Q99504 573 aa9.26□□□□□ -0.93
USP46-208ENST00000512656 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
USP46-208ENST00000512656 NSFL1CQ9UNZ2 370 aaKnown RBP9.26□□□□□ -0.93
USP46-208ENST00000512656 WDR33Q9C0J8 1336 aaKnown RBP9.26□□□□□ -0.93
USP46-208ENST00000512656 H7C1D1 291 aa9.25□□□□□ -0.93
USP46-208ENST00000512656 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
USP46-208ENST00000512656 RPS8P62241 208 aaKnown RBP9.25□□□□□ -0.93
USP46-208ENST00000512656 CCDC30Q5VVM6 783 aa9.25□□□□□ -0.93
USP46-208ENST00000512656 ZBTB38Q8NAP3 1195 aaPredicted RBP9.25□□□□□ -0.93
USP46-208ENST00000512656 BAP1Q92560 729 aa9.25□□□□□ -0.93
USP46-208ENST00000512656 DPF2Q92785 391 aa9.25□□□□□ -0.93
USP46-208ENST00000512656 KIFC2Q96AC6 838 aa9.25□□□□□ -0.93
USP46-208ENST00000512656 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
USP46-208ENST00000512656 CCDC152Q4G0S7 254 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 RTL5Q5HYW3 569 aaPredicted RBP9.24□□□□□ -0.93
USP46-208ENST00000512656 CDC37L1Q7L3B6 337 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 CCDC191Q8NCU4 936 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 CELF1Q92879 486 aaKnown RBP9.24□□□□□ -0.93
USP46-208ENST00000512656 ZNF428Q96B54 188 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 CAPNS2Q96L46 248 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 PGAP2Q9UHJ9 254 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 CNOT7Q9UIV1 285 aaKnown RBP9.24□□□□□ -0.93
USP46-208ENST00000512656 TLL2Q9Y6L7 1015 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 WASF2Q9Y6W5 498 aa9.24□□□□□ -0.93
USP46-208ENST00000512656 LTBP1Q14766 1721 aa9.23□□□□□ -0.93
USP46-208ENST00000512656 TRAF5O00463 557 aa9.23□□□□□ -0.93
USP46-208ENST00000512656 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
USP46-208ENST00000512656 CELF2O95319 508 aaKnown RBP9.23□□□□□ -0.93
USP46-208ENST00000512656 RPS12P25398 132 aaKnown RBP9.23□□□□□ -0.93
USP46-208ENST00000512656 MAP2K2P36507 400 aa9.23□□□□□ -0.93
USP46-208ENST00000512656 CST9Q5W186 159 aa9.23□□□□□ -0.93
USP46-208ENST00000512656 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
USP46-208ENST00000512656 GPR101Q96P66 508 aaPredicted RBP9.23□□□□□ -0.93
USP46-208ENST00000512656 MYD88Q99836 296 aa9.23□□□□□ -0.93
USP46-208ENST00000512656 ZC3H12CQ9C0D7 883 aaKnown RBP9.23□□□□□ -0.93
USP46-208ENST00000512656 CWC25Q9NXE8 425 aaPredicted RBP9.23□□□□□ -0.93
USP46-208ENST00000512656 YDJCA8MPS7 323 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 PSMD14O00487 310 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 PDE8AO60658 829 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 LILRB3O75022 631 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 PCCAP05165 728 aaPredicted RBP9.22□□□□□ -0.93
USP46-208ENST00000512656 CTHP32929 405 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 LBX1P52954 281 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 GPSM2P81274 684 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 GRM1Q13255 1194 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 CYP4F22Q6NT55 531 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 TBC1D16Q8TBP0 767 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 HHIPL1Q96JK4 782 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 METTL22Q9BUU2 404 aaPredicted RBP9.22□□□□□ -0.93
USP46-208ENST00000512656 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 GLIS2Q9BZE0 524 aaPredicted RBP9.22□□□□□ -0.93
USP46-208ENST00000512656 PHAXQ9H814 394 aaKnown RBP9.22□□□□□ -0.93
USP46-208ENST00000512656 DBNDD1Q9H9R9 158 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 PODXL2Q9NZ53 605 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 ANKIB1Q9P2G1 1089 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 POLLQ9UGP5 575 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 LAMB2P55268 1798 aa9.22□□□□□ -0.93
USP46-208ENST00000512656 CA12O43570 354 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 ECE2O60344 883 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 HSPA8P11142 646 aaKnown RBP9.21□□□□□ -0.94
USP46-208ENST00000512656 HIRAP54198 1017 aaPredicted RBP9.21□□□□□ -0.94
USP46-208ENST00000512656 FMR1Q06787 632 aaKnown RBP eCLIP9.21□□□□□ -0.94
USP46-208ENST00000512656 NEXNQ0ZGT2 675 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 LINC01559Q495D7 138 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
USP46-208ENST00000512656 SAPCD2Q86UD0 394 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 TRPM4Q8TD43 1214 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 LIMD1Q9UGP4 676 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 GGA1Q9UJY5 639 aa9.21□□□□□ -0.94
USP46-208ENST00000512656 LRRC37AA6NMS7 1700 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 UFL1O94874 794 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 CCDC27Q2M243 656 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 KSR2Q6VAB6 950 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 ANKRD18AQ8IVF6 992 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 FAM174AQ8TBP5 190 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 DCPSQ96C86 337 aaKnown RBP9.2□□□□□ -0.94
USP46-208ENST00000512656 CDC5LQ99459 802 aaKnown RBP9.2□□□□□ -0.94
USP46-208ENST00000512656 ZNF408Q9H9D4 720 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 SEC31BQ9NQW1 1179 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 MAP3K2Q9Y2U5 619 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 DUOX1Q9NRD9 1551 aa9.2□□□□□ -0.94
USP46-208ENST00000512656 DDX60Q8IY21 1712 aaKnown RBP9.19□□□□□ -0.94
USP46-208ENST00000512656 PI4KAP2A4QPH2 592 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 VIL1P09327 827 aaKnown RBP9.19□□□□□ -0.94
USP46-208ENST00000512656 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
USP46-208ENST00000512656 NOGQ13253 232 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 TBC1D10BQ4KMP7 808 aaPredicted RBP9.19□□□□□ -0.94
USP46-208ENST00000512656 KRT26Q7Z3Y9 468 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 USP48Q86UV5 1035 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 PI4KAP1Q8N8J0 262 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 C2orf69Q8N8R5 385 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 ARMC2Q8NEN0 867 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 XDHP47989 1333 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 TRPM7Q96QT4 1865 aa9.19□□□□□ -0.94
USP46-208ENST00000512656 SHTN1A0MZ66 631 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 AOC2O75106 756 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 ATP2B4P23634 1241 aa9.18□□□□□ -0.94
USP46-208ENST00000512656 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms