RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 NUCB1Q02818 461 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 DDX10Q13206 875 aaKnown RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 GRIN2CQ14957 1233 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 SAFBQ15424 915 aaKnown RBP eCLIP4.03□□□□□ -1.76
PVT1-202ENST00000512617 MAP3K11Q16584 847 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 PROX2Q3B8N5 592 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 PPP4R3BQ5MIZ7 849 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 TBCELQ5QJ74 424 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 MSL1Q68DK7 614 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 BLOC1S3Q6QNY0 202 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 TOGARAM2Q6ZUX3 1019 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 MAATS1Q7Z4T9 603 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 STRA8Q7Z7C7 330 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 ANKRD23Q86SG2 305 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 NBPF11Q86T75 865 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 SLC9A9Q8IVB4 645 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 SEPT12Q8IYM1 358 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 MSL3Q8N5Y2 521 aaKnown RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 GPR152Q8TDT2 470 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 SLC39A7Q92504 469 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 ZNF622Q969S3 477 aaKnown RBP eCLIP4.03□□□□□ -1.76
PVT1-202ENST00000512617 ZNF669Q96BR6 464 aaPredicted RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 SLC10A4Q96EP9 437 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 CDK5RAP3Q96JB5 506 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 RHOVQ96L33 236 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 DCBLD2Q96PD2 775 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 SLC26A8Q96RN1 970 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 NUDT12Q9BQG2 462 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 TRIM56Q9BRZ2 755 aaKnown RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 TARS2Q9BW92 718 aaKnown RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 RHOBTB2Q9BYZ6 727 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.03□□□□□ -1.76
PVT1-202ENST00000512617 GGNBP2Q9H3C7 697 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 RETREG1Q9H6L5 497 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 LUC7LQ9NQ29 371 aaKnown RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 KCNQ5Q9NR82 932 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 FAM50BQ9Y247 325 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 DIS3Q9Y2L1 958 aaKnown RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 SLC45A1Q9Y2W3 748 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 SPEF1Q9Y4P9 236 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 DGKBQ9Y6T7 804 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 KLRG2A4D1S0 409 aaPredicted RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 POTECB2RU33 542 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 APAF1O14727 1248 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 CLGNO14967 610 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 ORC4O43929 436 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 GREM1O60565 184 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 ABLIM3O94929 683 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 RHOBTB3O94955 611 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 EYA4O95677 639 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 PGRP06401 933 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 FAM153BP0C7A2 387 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 FAM200BP0CF97 657 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 TYRP1P17643 537 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 TNFAIP3P21580 790 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 RENBPP51606 427 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 STRN3Q13033 797 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 DGKZQ13574 1117 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 CBX2Q14781 532 aaPredicted RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 NBPF1Q3BBV0 1214 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 C11orf91Q3C1V1 193 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 MINDY4Q4G0A6 757 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 RNF219Q5W0B1 726 aaPredicted RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 CNNM4Q6P4Q7 775 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 CFAP161Q6P656 301 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 RASSF3Q86WH2 238 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 CHCHD4Q8N4Q1 142 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 GOLM1Q8NBJ4 401 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 USP33Q8TEY7 942 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 LEO1Q8WVC0 666 aaPredicted RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 ATXN2LQ8WWM7 1075 aaKnown RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 RSPH1Q8WYR4 309 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 GJA10Q969M2 543 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 TNIP3Q96KP6 325 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 RUSC1Q9BVN2 902 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 TNKS2Q9H2K2 1166 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 NPHS2Q9NP85 383 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 RIC8AQ9NPQ8 531 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 KIAA1468Q9P260 1216 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 IP6K2Q9UHH9 426 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 GTF2IRD1Q9UHL9 959 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 FEZ2Q9UHY8 353 aaPredicted RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 FOXD3Q9UJU5 478 aaPredicted RBP4.02□□□□□ -1.77
PVT1-202ENST00000512617 RCAN3Q9UKA8 241 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 MAP4K5Q9Y4K4 846 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 PHLDB1Q86UU1 1377 aa4.02□□□□□ -1.77
PVT1-202ENST00000512617 DNAJC25-GNG10A0A024R161 153 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 B2RBV5 119 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 hCG_1984214I3L0E3 225 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 GALR2O43603 387 aaPredicted RBP4.01□□□□□ -1.77
PVT1-202ENST00000512617 SNX2O60749 519 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 ZPR1O75312 459 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 MICAL2O94851 1124 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 PF4P02776 101 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 INHAP05111 366 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 SCP2P22307 547 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 ATICP31939 592 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 MCM4P33991 863 aa4.01□□□□□ -1.77
PVT1-202ENST00000512617 CRKP46108 304 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms