RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TMCO4Q5TGY1 634 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 ANGPTL3Q9Y5C1 460 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 ANXA13P27216 316 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 INPP1P49441 399 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 IGBP1P78318 339 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 PSMD6Q15008 389 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 MTRQ99707 1265 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 CSRNP2Q9H175 543 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 JADE2Q9NQC1 790 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 BZW2Q9Y6E2 419 aaKnown RBP9.99□□□□□ -0.81
VCAN-208ENST00000512590 CD19P15391 556 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 PRPF40BQ6NWY9 871 aaKnown RBP9.99□□□□□ -0.81
VCAN-208ENST00000512590 NCOA7Q8NI08 942 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 NEMP1O14524 444 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 MGEA5O60502 916 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 PARP1P09874 1014 aaKnown RBP9.99□□□□□ -0.81
VCAN-208ENST00000512590 CASC4Q6P4E1 433 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 DPF3Q92784 378 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 PANK2Q9BZ23 570 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 KCNH4Q9UQ05 1017 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 ATF5Q9Y2D1 282 aaPredicted RBP9.99□□□□□ -0.81
VCAN-208ENST00000512590 PRDM2Q13029 1718 aa9.99□□□□□ -0.81
VCAN-208ENST00000512590 IL2RBP14784 551 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 RARSP54136 660 aaKnown RBP9.98□□□□□ -0.81
VCAN-208ENST00000512590 YWHAEP62258 255 aaKnown RBP9.98□□□□□ -0.81
VCAN-208ENST00000512590 HS6ST3Q8IZP7 471 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 ANKRD35Q8N283 1001 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 SERTAD1Q9UHV2 236 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 PYGLP06737 847 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 KCNJ6P48051 423 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 HAND2P61296 217 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 WASHC5Q12768 1159 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 RPS6KA2Q15349 733 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 RRAGBQ5VZM2 374 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 E4F1Q66K89 784 aaPredicted RBP9.98□□□□□ -0.81
VCAN-208ENST00000512590 ZSCAN32Q9NX65 697 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
VCAN-208ENST00000512590 PTK2BQ14289 1009 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.98□□□□□ -0.81
VCAN-208ENST00000512590 ARHGEF16Q5VV41 709 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 PHLDB2Q86SQ0 1253 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 ZBTB8OSQ8IWT0 167 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 TMX1Q9H3N1 280 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 SLC12A6Q9UHW9 1150 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 ODR4Q5SWX8 454 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 IRAK1BP1Q5VVH5 260 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 LMBR1LQ6UX01 489 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 TRIM50Q86XT4 487 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 C2CD5Q86YS7 1000 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 TTC14Q96N46 770 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 CPSF3Q9UKF6 684 aaKnown RBP9.98□□□□□ -0.81
VCAN-208ENST00000512590 USP16Q9Y5T5 823 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 ARHGEF35A5YM69 484 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 GADD45BO75293 160 aaPredicted RBP9.98□□□□□ -0.81
VCAN-208ENST00000512590 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 TCP11L2Q8N4U5 519 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 TTC1Q99614 292 aa9.98□□□□□ -0.81
VCAN-208ENST00000512590 SORBS3O60504 671 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 RECQLP46063 649 aaPredicted RBP9.97□□□□□ -0.81
VCAN-208ENST00000512590 RSRC2Q7L4I2 434 aaKnown RBP9.97□□□□□ -0.81
VCAN-208ENST00000512590 EXOC6Q8TAG9 804 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 DNAAF4Q8WXU2 420 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 NUF2Q9BZD4 464 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 CNNM2Q9H8M5 875 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 WDR64B1ANS9 1081 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 FAM43AQ8N2R8 423 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 TMEM57Q8N5G2 664 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 SLC10A4Q96EP9 437 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 HAUS8Q9BT25 410 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 KRT3P12035 628 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 MRE11P49959 708 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 MAEAQ7L5Y9 396 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 NDUFAF2Q8N183 169 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 NEK1Q96PY6 1258 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 MMS19Q96T76 1030 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 PARP2Q9UGN5 583 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 BAG5Q9UL15 447 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 ATP8B3O60423 1300 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 UBXN8O00124 270 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 TCP10Q12799 353 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 DCAF17Q5H9S7 520 aaPredicted RBP9.97□□□□□ -0.81
VCAN-208ENST00000512590 TMTC2Q8N394 836 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 ANO10Q9NW15 660 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 DBF4Q9UBU7 674 aaPredicted RBP9.97□□□□□ -0.81
VCAN-208ENST00000512590 ARHGEF37A1IGU5 675 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 NPM3O75607 178 aaKnown RBP9.97□□□□□ -0.81
VCAN-208ENST00000512590 ATXN3P54252 364 aaPredicted RBP9.97□□□□□ -0.81
VCAN-208ENST00000512590 TAOK1Q7L7X3 1001 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 DEPTORQ8TB45 409 aa9.97□□□□□ -0.81
VCAN-208ENST00000512590 RPL13P26373 211 aaKnown RBP9.96□□□□□ -0.81
VCAN-208ENST00000512590 TYRO3Q06418 890 aa9.96□□□□□ -0.81
VCAN-208ENST00000512590 PTGDRQ13258 359 aa9.96□□□□□ -0.81
VCAN-208ENST00000512590 SEL1L2Q5TEA6 688 aa9.96□□□□□ -0.81
VCAN-208ENST00000512590 SWAP70Q9UH65 585 aa9.96□□□□□ -0.81
VCAN-208ENST00000512590 XPOTO43592 962 aaKnown RBP9.96□□□□□ -0.81
VCAN-208ENST00000512590 GNA11P29992 359 aa9.96□□□□□ -0.81
VCAN-208ENST00000512590 HERC4Q5GLZ8 1057 aaPredicted RBP9.96□□□□□ -0.81
VCAN-208ENST00000512590 CC2D1AQ6P1N0 951 aaPredicted RBP9.96□□□□□ -0.81
VCAN-208ENST00000512590 IPO4Q8TEX9 1081 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms