RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CTSWP56202 376 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 G2E3Q7L622 706 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 C7orf61Q8IZ16 206 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 GREM2Q9H772 168 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 LEMD3Q9Y2U8 911 aa13.01□□□□□ -0.33
PDLIM5-217ENST00000512274 RANBP2P49792 3224 aaKnown RBP13□□□□□ -0.33
PDLIM5-217ENST00000512274 MGAMO43451 1857 aa13□□□□□ -0.33
PDLIM5-217ENST00000512274 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
PDLIM5-217ENST00000512274 C17orf99Q6UX52 265 aa13□□□□□ -0.33
PDLIM5-217ENST00000512274 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
PDLIM5-217ENST00000512274 CCDC191Q8NCU4 936 aa13□□□□□ -0.33
PDLIM5-217ENST00000512274 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
PDLIM5-217ENST00000512274 TDRD3Q9H7E2 651 aaKnown RBP13□□□□□ -0.33
PDLIM5-217ENST00000512274 CWC25Q9NXE8 425 aaPredicted RBP13□□□□□ -0.33
PDLIM5-217ENST00000512274 GABRQQ9UN88 632 aa13□□□□□ -0.33
PDLIM5-217ENST00000512274 A0A0C4DFX4 3053 aa13□□□□□ -0.33
PDLIM5-217ENST00000512274 SNAP23O00161 211 aa12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 KCNJ4P48050 445 aa12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 PRKCZQ05513 592 aa12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 TTLL11Q8NHH1 800 aa12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■□□ 17.2
PDLIM5-217ENST00000512274 DIS3LQ8TF46 1054 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 DEFB118Q96PH6 123 aa12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-217ENST00000512274 IRF6O14896 467 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 DDX58O95786 925 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 IGHDP01880 384 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 GNAI3P08754 354 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 COL9A1P20849 921 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 LRIT3Q3SXY7 679 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 TDHQ8IZJ6 230 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 TEPSINQ96N21 525 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 TMEM39BQ9GZU3 492 aa12.98□□□□□ -0.33
PDLIM5-217ENST00000512274 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 RPTORQ8N122 1335 aa12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 ELNP15502 786 aa12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 SNAPC2Q13487 334 aa12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 HELBQ8NG08 1087 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 ZKSCAN4Q969J2 545 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 HDAC5Q9UQL6 1122 aa12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
PDLIM5-217ENST00000512274 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 UTYO14607 1347 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 PDHXO00330 501 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 ADCY3O60266 1144 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 BEND3Q5T5X7 828 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 ERO1BQ86YB8 467 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 SLAIN1Q8ND83 568 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 UBE2OQ9C0C9 1292 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 RAPGEFL1Q9UHV5 662 aa12.96□□□□□ -0.33
PDLIM5-217ENST00000512274 TAF5LO75529 589 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 INHAP05111 366 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 CHRNDQ07001 517 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 NECAB2Q7Z6G3 386 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 WRNIP1Q96S55 665 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 MPHOSPH8Q99549 860 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
PDLIM5-217ENST00000512274 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
PDLIM5-217ENST00000512274 FCGRTP55899 365 aa12.94□□□□□ -0.34
PDLIM5-217ENST00000512274 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
PDLIM5-217ENST00000512274 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
PDLIM5-217ENST00000512274 METTL22Q9BUU2 404 aaPredicted RBP12.94□□□□□ -0.34
PDLIM5-217ENST00000512274 F6X3S4 739 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 GNAI2P04899 355 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 TNNI2P48788 182 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 FLT3LGP49771 235 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 PPIL2Q13356 520 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 MTX1Q13505 466 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 CEP85Q6P2H3 762 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 SIRT2Q8IXJ6 389 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 MEIS3Q99687 375 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 USP44Q9H0E7 712 aa12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 TTF2Q9UNY4 1162 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-217ENST00000512274 ADGRA2Q96PE1 1338 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 HMMRO75330 724 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 ITGA6P23229 1130 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 CACNB3P54284 484 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 ZNF804AQ7Z570 1209 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 DCTPP1Q9H773 170 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 UNC80Q8N2C7 3258 aa12.92□□□□□ -0.34
PDLIM5-217ENST00000512274 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms