RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 COX20Q5RI15 118 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 ETFBKMTQ8IXQ9 262 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 CCER1Q8TC90 406 aaPredicted RBP7.46□□□□□ -1.22
MSH3-202ENST00000512258 SIN3AQ96ST3 1273 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 RASSF4Q9H2L5 321 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 KCNF1Q9H3M0 494 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 PTPRMP28827 1452 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 ERVK-7P63135 1459 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 PREX1Q8TCU6 1659 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 NOS1P29475 1434 aa7.45□□□□□ -1.22
MSH3-202ENST00000512258 SH2B1Q9NRF2 756 aaPredicted RBP7.45□□□□□ -1.22
MSH3-202ENST00000512258 HIF3AQ9Y2N7 669 aa7.45□□□□□ -1.22
MSH3-202ENST00000512258 SPATA31D1Q6ZQQ2 1576 aa7.45□□□□□ -1.22
MSH3-202ENST00000512258 PTPRTO14522 1441 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 SPHKAPQ2M3C7 1700 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 RPRD2Q5VT52 1461 aaKnown RBP7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L21D6R901 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 FOSL1P15407 271 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 ANKRD34AQ69YU3 496 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 ASIC4Q96FT7 647 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 ACIN1Q9UKV3 1341 aaKnown RBP7.44□□□□□ -1.22
MSH3-202ENST00000512258 CLTCL1P53675 1640 aa7.44□□□□□ -1.22
MSH3-202ENST00000512258 TRPM2O94759 1503 aa7.43□□□□□ -1.22
MSH3-202ENST00000512258 FAM196BA6NMK8 535 aa7.43□□□□□ -1.22
MSH3-202ENST00000512258 KIF4AO95239 1232 aa7.43□□□□□ -1.22
MSH3-202ENST00000512258 SEC31BQ9NQW1 1179 aa7.43□□□□□ -1.22
MSH3-202ENST00000512258 ANGEL1Q9UNK9 670 aaKnown RBP7.43□□□□□ -1.22
MSH3-202ENST00000512258 TNRQ92752 1358 aa7.43□□□□□ -1.22
MSH3-202ENST00000512258 SMNDC1O75940 238 aaKnown RBP eCLIP7.42□□□□□ -1.22
MSH3-202ENST00000512258 HYAL2Q12891 473 aa7.42□□□□□ -1.22
MSH3-202ENST00000512258 IDI1Q13907 227 aa7.42□□□□□ -1.22
MSH3-202ENST00000512258 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
MSH3-202ENST00000512258 ADAM19Q9H013 955 aa7.42□□□□□ -1.22
MSH3-202ENST00000512258 ZMYND15Q9H091 742 aa7.42□□□□□ -1.22
MSH3-202ENST00000512258 PIK3C2BO00750 1634 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
MSH3-202ENST00000512258 RAD21O60216 631 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 MAP4P27816 1152 aaKnown RBP7.41□□□□□ -1.22
MSH3-202ENST00000512258 SGO2Q562F6 1265 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 VSIG10LQ86VR7 867 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 POP1Q99575 1024 aaKnown RBP7.41□□□□□ -1.22
MSH3-202ENST00000512258 PBX4Q9BYU1 374 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 RNF208Q9H0X6 261 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 LEMD3Q9Y2U8 911 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 CCDC144AA2RUR9 1427 aa7.41□□□□□ -1.22
MSH3-202ENST00000512258 JUNBP17275 347 aaPredicted RBP7.4□□□□□ -1.22
MSH3-202ENST00000512258 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
MSH3-202ENST00000512258 SPOCD1Q6ZMY3 1216 aa7.4□□□□□ -1.22
MSH3-202ENST00000512258 CEP120Q8N960 986 aa7.4□□□□□ -1.22
MSH3-202ENST00000512258 VTI1AQ96AJ9 217 aa7.4□□□□□ -1.22
MSH3-202ENST00000512258 FBXL18Q96ME1 805 aa7.4□□□□□ -1.22
MSH3-202ENST00000512258 SAP130Q9H0E3 1048 aa7.4□□□□□ -1.22
MSH3-202ENST00000512258 MYO3AQ8NEV4 1616 aa7.4□□□□□ -1.22
MSH3-202ENST00000512258 MYO5BQ9ULV0 1848 aa7.39□□□□□ -1.23
MSH3-202ENST00000512258 CYP2E1P05181 493 aaPredicted RBP7.39□□□□□ -1.23
MSH3-202ENST00000512258 RGL3Q3MIN7 710 aa7.39□□□□□ -1.23
MSH3-202ENST00000512258 FAM117BQ6P1L5 589 aa7.39□□□□□ -1.23
MSH3-202ENST00000512258 FBXL6Q8N531 539 aa7.39□□□□□ -1.23
MSH3-202ENST00000512258 WNT8BQ93098 351 aa7.39□□□□□ -1.23
MSH3-202ENST00000512258 ATG3Q9NT62 314 aa7.39□□□□□ -1.23
MSH3-202ENST00000512258 TMEM131LA2VDJ0 1609 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 SPATA31E1Q6ZUB1 1445 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 MEGF11A6BM72 1044 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 UBAP1LF5GYI3 381 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 H3BRJ5 948 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 PAPLNO95428 1278 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 CPSF6Q16630 551 aaKnown RBP eCLIP7.38□□□□□ -1.23
MSH3-202ENST00000512258 FBLN7Q53RD9 439 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 GLMNQ92990 594 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 SPACA7Q96KW9 195 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 RUSC1Q9BVN2 902 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 SLC52A1Q9NWF4 448 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.38□□□□□ -1.23
MSH3-202ENST00000512258 UBR1Q8IWV7 1749 aa7.38□□□□□ -1.23
MSH3-202ENST00000512258 CEP170BQ9Y4F5 1589 aaPredicted RBP7.37□□□□□ -1.23
MSH3-202ENST00000512258 ADGRB3O60242 1522 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 A2ML1A8K2U0 1454 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 CLSPNQ9HAW4 1339 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 PTPRAP18433 802 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 NLRP12P59046 1061 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 PIP4K2BP78356 416 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 HGSNATQ68CP4 663 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 TP53INP2Q8IXH6 220 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 OSGEPQ9NPF4 335 aa7.37□□□□□ -1.23
MSH3-202ENST00000512258 PAK6Q9NQU5 681 aaPredicted RBP7.37□□□□□ -1.23
MSH3-202ENST00000512258 NLRP1Q9C000 1473 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms