RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 CDC42EP5Q6NZY7 148 aa18.99■□□□□ 0.63
COL1A1-213ENST00000511732 XAGE2Q96GT9 111 aa18.99■□□□□ 0.63
COL1A1-213ENST00000511732 MS4A4AQ96JQ5 239 aa18.99■□□□□ 0.63
COL1A1-213ENST00000511732 MYH2Q9UKX2 1941 aa18.98■□□□□ 0.63
COL1A1-213ENST00000511732 RPAP1Q9BWH6 1393 aaPredicted RBP18.98■□□□□ 0.63
COL1A1-213ENST00000511732 NFIAQ12857 509 aa18.98■□□□□ 0.63
COL1A1-213ENST00000511732 RASGRF1Q13972 1273 aa18.98■□□□□ 0.63
COL1A1-213ENST00000511732 FAM151AQ8WW52 585 aa18.97■□□□□ 0.63
COL1A1-213ENST00000511732 HPS5Q9UPZ3 1129 aa18.97■□□□□ 0.63
COL1A1-213ENST00000511732 SNCAIPQ9Y6H5 919 aa18.97■□□□□ 0.63
COL1A1-213ENST00000511732 TCP10Q12799 353 aa18.96■□□□□ 0.63
COL1A1-213ENST00000511732 CRHR2Q13324 411 aa18.96■□□□□ 0.63
COL1A1-213ENST00000511732 MIGA2Q7L4E1 593 aa18.96■□□□□ 0.63
COL1A1-213ENST00000511732 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
COL1A1-213ENST00000511732 WRNIP1Q96S55 665 aa18.96■□□□□ 0.63
COL1A1-213ENST00000511732 FAM198AQ9UFP1 575 aa18.96■□□□□ 0.63
COL1A1-213ENST00000511732 AKAP2Q9Y2D5 859 aa18.96■□□□□ 0.63
COL1A1-213ENST00000511732 CSADQ9Y600 493 aa18.96■□□□□ 0.63
COL1A1-213ENST00000511732 SPDYE5A6NIY4 337 aa18.95■□□□□ 0.62
COL1A1-213ENST00000511732 RLBP1P12271 317 aa18.95■□□□□ 0.62
COL1A1-213ENST00000511732 MLLT1Q03111 559 aaPredicted RBP18.95■□□□□ 0.62
COL1A1-213ENST00000511732 PKN2Q16513 984 aaKnown RBP18.95■□□□□ 0.62
COL1A1-213ENST00000511732 ZFPM1Q8IX07 1006 aa18.95■□□□□ 0.62
COL1A1-213ENST00000511732 BRI3BPQ8WY22 251 aa18.95■□□□□ 0.62
COL1A1-213ENST00000511732 OTUD5Q96G74 571 aa18.95■□□□□ 0.62
COL1A1-213ENST00000511732 NEUROD6Q96NK8 337 aa18.95■□□□□ 0.62
COL1A1-213ENST00000511732 USP40Q9NVE5 1235 aa18.95■□□□□ 0.62
COL1A1-213ENST00000511732 PDS5AQ29RF7 1337 aaKnown RBP18.95■□□□□ 0.62
COL1A1-213ENST00000511732 AK9Q5TCS8 1911 aa18.94■□□□□ 0.62
COL1A1-213ENST00000511732 SOX10P56693 466 aa18.94■□□□□ 0.62
COL1A1-213ENST00000511732 MVPQ14764 893 aaKnown RBP18.94■□□□□ 0.62
COL1A1-213ENST00000511732 ZGPATQ8N5A5 531 aaKnown RBP18.94■□□□□ 0.62
COL1A1-213ENST00000511732 ABCF2Q9UG63 623 aa18.94■□□□□ 0.62
COL1A1-213ENST00000511732 GAKO14976 1311 aa18.94■□□□□ 0.62
COL1A1-213ENST00000511732 CCL15-CCL14A0A0B4J2E2 113 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 INPP5BP32019 993 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 CAP1Q01518 475 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 G3BP1Q13283 466 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL1A1-213ENST00000511732 POLA2Q14181 598 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 CCL15Q16663 113 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 DCAF15Q66K64 600 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 OTUD7BQ6GQQ9 843 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 PI16Q6UXB8 463 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 ERO1BQ86YB8 467 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 ZNF384Q8TF68 577 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 HOOK2Q96ED9 719 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 C1orf115Q9H7X2 142 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 HMG20BQ9P0W2 317 aa18.93■□□□□ 0.62
COL1A1-213ENST00000511732 GTF2A2P52657 109 aa18.92■□□□□ 0.62
COL1A1-213ENST00000511732 FBXO46Q6PJ61 603 aaPredicted RBP18.92■□□□□ 0.62
COL1A1-213ENST00000511732 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
COL1A1-213ENST00000511732 ZNF341Q9BYN7 854 aa18.92■□□□□ 0.62
COL1A1-213ENST00000511732 ZBED9Q6R2W3 1325 aa18.92■□□□□ 0.62
COL1A1-213ENST00000511732 RFX7Q2KHR2 1363 aa18.92■□□□□ 0.62
COL1A1-213ENST00000511732 DOCK2Q92608 1830 aa18.91■□□□□ 0.62
COL1A1-213ENST00000511732 IRF6O14896 467 aa18.91■□□□□ 0.62
COL1A1-213ENST00000511732 ZBTB7BO15156 539 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-213ENST00000511732 ATP8B2P98198 1209 aa18.91■□□□□ 0.62
COL1A1-213ENST00000511732 DZIP1Q86YF9 867 aaKnown RBP18.91■□□□□ 0.62
COL1A1-213ENST00000511732 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
COL1A1-213ENST00000511732 FAM163AQ96GL9 167 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-213ENST00000511732 ZNF112Q9UJU3 913 aa18.91■□□□□ 0.62
COL1A1-213ENST00000511732 ARID4AP29374 1257 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-213ENST00000511732 RGS3P49796 1198 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 MECOMQ03112 1051 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 SH3BP5LQ7L8J4 393 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 OTOP1Q7RTM1 612 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 FTSJ3Q8IY81 847 aaKnown RBP18.9■□□□□ 0.62
COL1A1-213ENST00000511732 CD99L2Q8TCZ2 262 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 IDI2Q9BXS1 227 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 TRIM17Q9Y577 477 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 ATRNL1Q5VV63 1379 aa18.9■□□□□ 0.62
COL1A1-213ENST00000511732 WDHD1O75717 1129 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-213ENST00000511732 SLURP2P0DP57 97 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 MCAMP43121 646 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 BTDP43251 543 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 PPIL2Q13356 520 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 SPTY2D1Q68D10 685 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-213ENST00000511732 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 ITPRIPQ8IWB1 547 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 SPATA5Q8NB90 893 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 DDX4Q9NQI0 724 aaKnown RBP18.89■□□□□ 0.61
COL1A1-213ENST00000511732 MROH7-TTC4A0A0A0MT08 1334 aa18.89■□□□□ 0.61
COL1A1-213ENST00000511732 ENTPD3O75355 529 aa18.88■□□□□ 0.61
COL1A1-213ENST00000511732 SP3Q02447 781 aa18.88■□□□□ 0.61
COL1A1-213ENST00000511732 PPATQ06203 517 aa18.88■□□□□ 0.61
COL1A1-213ENST00000511732 TAF1CQ15572 869 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-213ENST00000511732 GORABQ5T7V8 394 aa18.88■□□□□ 0.61
COL1A1-213ENST00000511732 GPR75-ASB3A0A0A6YYF3 556 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 BTBD19C9JJ37 291 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 CETPP11597 493 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 RHBDL3P58872 404 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 TNNI3KQ59H18 835 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 NSUN4Q96CB9 384 aaKnown RBP18.87■□□□□ 0.61
COL1A1-213ENST00000511732 ERO1AQ96HE7 468 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 GPR108Q9NPR9 543 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 FPGT-TNNI3KV9GXZ4 949 aa18.87■□□□□ 0.61
COL1A1-213ENST00000511732 DDTLA6NHG4 134 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-213ENST00000511732 PHF20L1A8MW92 1017 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms