RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SLX4Q8IY92 1834 aa18■□□□□ 0.47
SCLT1-209ENST00000511426 MROH7-TTC4A0A0A0MT08 1334 aa18■□□□□ 0.47
SCLT1-209ENST00000511426 PSMD1Q99460 953 aa17.99■□□□□ 0.47
SCLT1-209ENST00000511426 KRT23Q9C075 422 aa17.99■□□□□ 0.47
SCLT1-209ENST00000511426 CPA1P15085 419 aa17.99■□□□□ 0.47
SCLT1-209ENST00000511426 KIAA2012Q0VF49 1180 aa17.99■□□□□ 0.47
SCLT1-209ENST00000511426 TOB2Q14106 344 aaPredicted RBP17.99■□□□□ 0.47
SCLT1-209ENST00000511426 MB21D2Q8IYB1 491 aaPredicted RBP17.99■□□□□ 0.47
SCLT1-209ENST00000511426 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
SCLT1-209ENST00000511426 STAG1Q8WVM7 1258 aa17.99■□□□□ 0.47
SCLT1-209ENST00000511426 GAKO14976 1311 aa17.98■□□□□ 0.47
SCLT1-209ENST00000511426 EVCP57679 992 aa17.98■□□□□ 0.47
SCLT1-209ENST00000511426 FGD1P98174 961 aa17.98■□□□□ 0.47
SCLT1-209ENST00000511426 ARPP21Q9UBL0 812 aaPredicted RBP17.98■□□□□ 0.47
SCLT1-209ENST00000511426 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
SCLT1-209ENST00000511426 RIMBP2O15034 1052 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 HAND2P61296 217 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 GTF2IP78347 998 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 SBK1Q52WX2 424 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 AKNAD1Q5T1N1 836 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 STRIP1Q5VSL9 837 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 TMEM87BQ96K49 555 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 MRIQ9BWK5 157 aa17.97■□□□□ 0.47
SCLT1-209ENST00000511426 GPR75-ASB3A0A0A6YYF3 556 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 ZBTB7AO95365 584 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 KCNA3P22001 575 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 Q6ZUG5 572 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 AATFQ9NY61 560 aaKnown RBP eCLIP17.96■□□□□ 0.47
SCLT1-209ENST00000511426 PIM2Q9P1W9 311 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 TPCN1Q9ULQ1 816 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 PRKAB2O43741 272 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 DPEP1P16444 411 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 PPARAQ07869 468 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 MFSD6Q6ZSS7 791 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 ZNF274Q96GC6 653 aaPredicted RBP17.96■□□□□ 0.47
SCLT1-209ENST00000511426 SGIP1Q9BQI5 828 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 NBPF3Q9H094 633 aa17.96■□□□□ 0.47
SCLT1-209ENST00000511426 SLC3A2P08195 630 aaKnown RBP17.95■□□□□ 0.46
SCLT1-209ENST00000511426 DYNLL1P63167 89 aaKnown RBP17.95■□□□□ 0.46
SCLT1-209ENST00000511426 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
SCLT1-209ENST00000511426 R3HDM1Q15032 1099 aaKnown RBP17.95■□□□□ 0.46
SCLT1-209ENST00000511426 ME3Q16798 604 aa17.95■□□□□ 0.46
SCLT1-209ENST00000511426 OLFM4Q6UX06 510 aa17.95■□□□□ 0.46
SCLT1-209ENST00000511426 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
SCLT1-209ENST00000511426 AMOTL1Q8IY63 956 aa17.95■□□□□ 0.46
SCLT1-209ENST00000511426 SDR42E1Q8WUS8 393 aa17.95■□□□□ 0.46
SCLT1-209ENST00000511426 DCP1AQ9NPI6 582 aaPredicted RBP17.95■□□□□ 0.46
SCLT1-209ENST00000511426 FGRP09769 529 aa17.94■□□□□ 0.46
SCLT1-209ENST00000511426 JAG2Q9Y219 1238 aa17.94■□□□□ 0.46
SCLT1-209ENST00000511426 A0A0G2JLW4 131 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 PRC1O43663 620 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 C21orf2O43822 256 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 HHIPL2Q6UWX4 724 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 BRF1Q92994 677 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 LLPHQ9BRT6 129 aaKnown RBP17.93■□□□□ 0.46
SCLT1-209ENST00000511426 SMC3Q9UQE7 1217 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 MYO3BQ8WXR4 1341 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 ECE2O60344 883 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 SART3Q15020 963 aaKnown RBP17.93■□□□□ 0.46
SCLT1-209ENST00000511426 CLEC17AQ6ZS10 378 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 GTF3C6Q969F1 213 aa17.93■□□□□ 0.46
SCLT1-209ENST00000511426 MKRN1Q9UHC7 482 aaKnown RBP17.93■□□□□ 0.46
SCLT1-209ENST00000511426 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
SCLT1-209ENST00000511426 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 PFKFB2O60825 505 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 LIFRP42702 1097 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 BTDP43251 543 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 TMTC2Q8N394 836 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 ESR2Q92731 530 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 TCEANC2Q96MN5 208 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
SCLT1-209ENST00000511426 ATF5Q9Y2D1 282 aaPredicted RBP17.92■□□□□ 0.46
SCLT1-209ENST00000511426 ROBO3Q96MS0 1386 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 PPIP5K2O43314 1243 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
SCLT1-209ENST00000511426 PDCP20941 246 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 USP5P45974 858 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 RCAN1P53805 252 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 DIXDC1Q155Q3 683 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 GRIK5Q16478 980 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 DALRD3Q5D0E6 543 aaKnown RBP17.91■□□□□ 0.46
SCLT1-209ENST00000511426 CTR9Q6PD62 1173 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 SGMS1Q86VZ5 419 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 CCDC83Q8IWF9 413 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 KIF3AQ9Y496 699 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 LAMB1P07942 1786 aa17.91■□□□□ 0.46
SCLT1-209ENST00000511426 ORC4O43929 436 aa17.9■□□□□ 0.46
SCLT1-209ENST00000511426 LARGE1O95461 756 aa17.9■□□□□ 0.46
SCLT1-209ENST00000511426 PTMSP20962 102 aa17.9■□□□□ 0.46
SCLT1-209ENST00000511426 ANTXR2P58335 489 aa17.9■□□□□ 0.46
SCLT1-209ENST00000511426 COL9A3Q14050 684 aaPredicted RBP17.9■□□□□ 0.46
SCLT1-209ENST00000511426 DACT2Q5SW24 774 aa17.9■□□□□ 0.46
SCLT1-209ENST00000511426 DBNDD1Q9H9R9 158 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms