RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 ZSCAN16Q9H4T2 348 aaPredicted RBP16.48■□□□□ 0.23
NME1-209ENST00000511355 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
NME1-209ENST00000511355 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
NME1-209ENST00000511355 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
NME1-209ENST00000511355 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
NME1-209ENST00000511355 CCDC102BQ68D86 513 aa16.47■□□□□ 0.23
NME1-209ENST00000511355 C15orf52Q6ZUT6 534 aaKnown RBP16.47■□□□□ 0.23
NME1-209ENST00000511355 RNF214Q8ND24 703 aa16.47■□□□□ 0.23
NME1-209ENST00000511355 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
NME1-209ENST00000511355 KIF3AQ9Y496 699 aa16.47■□□□□ 0.23
NME1-209ENST00000511355 SNED1Q8TER0 1413 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 UQCRFS1P1P0C7P4 283 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
NME1-209ENST00000511355 RBM43Q6ZSC3 357 aaKnown RBP16.46■□□□□ 0.23
NME1-209ENST00000511355 SLC51AQ86UW1 340 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 CHAMP1Q96JM3 812 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 GDPD2Q9HCC8 539 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 SPTLC3Q9NUV7 552 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 TPCN1Q9ULQ1 816 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 IRS2Q9Y4H2 1338 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 TIAM2Q8IVF5 1701 aa16.46■□□□□ 0.23
NME1-209ENST00000511355 FER1L6Q2WGJ9 1857 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 UFL1O94874 794 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 LARGE1O95461 756 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 PRELPP51888 382 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 DNM1Q05193 864 aaKnown RBP16.45■□□□□ 0.22
NME1-209ENST00000511355 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 MPNDQ8N594 471 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 HAUS7Q99871 368 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 ZBTB22O15209 634 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 FIBPO43427 364 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 ADCY5O95622 1261 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 PHKA1P46020 1223 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 ST3GAL1Q11201 340 aa16.45■□□□□ 0.22
NME1-209ENST00000511355 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
NME1-209ENST00000511355 R3HCC1Q9Y3T6 440 aaKnown RBP16.45■□□□□ 0.22
NME1-209ENST00000511355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
NME1-209ENST00000511355 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
NME1-209ENST00000511355 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
NME1-209ENST00000511355 FBXL16Q8N461 479 aa16.44■□□□□ 0.22
NME1-209ENST00000511355 FAM200AQ8TCP9 573 aa16.44■□□□□ 0.22
NME1-209ENST00000511355 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
NME1-209ENST00000511355 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
NME1-209ENST00000511355 CFAP45Q9UL16 551 aa16.44■□□□□ 0.22
NME1-209ENST00000511355 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
NME1-209ENST00000511355 KLRK1P26718 216 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 GYG1P46976 350 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 BCAMP50895 628 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 LRRFIP1Q32MZ4 808 aaKnown RBP16.43■□□□□ 0.22
NME1-209ENST00000511355 MCMDC2Q4G0Z9 681 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
NME1-209ENST00000511355 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 RTKN2Q8IZC4 609 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 FAM84BQ96KN1 310 aaPredicted RBP16.43■□□□□ 0.22
NME1-209ENST00000511355 NEK1Q96PY6 1258 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 NUP62CLQ9H1M0 184 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 AKAP11Q9UKA4 1901 aa16.43■□□□□ 0.22
NME1-209ENST00000511355 A0A0D9SFI3 127 aa16.42■□□□□ 0.22
NME1-209ENST00000511355 SEMA3EO15041 775 aa16.42■□□□□ 0.22
NME1-209ENST00000511355 GTF2F1P35269 517 aaKnown RBP eCLIP16.42■□□□□ 0.22
NME1-209ENST00000511355 MCAMP43121 646 aa16.42■□□□□ 0.22
NME1-209ENST00000511355 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
NME1-209ENST00000511355 OLFM4Q6UX06 510 aa16.42■□□□□ 0.22
NME1-209ENST00000511355 FBXO33Q7Z6M2 555 aa16.42■□□□□ 0.22
NME1-209ENST00000511355 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
NME1-209ENST00000511355 RTFDC1Q9BY42 306 aaPredicted RBP16.42■□□□□ 0.22
NME1-209ENST00000511355 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
NME1-209ENST00000511355 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
NME1-209ENST00000511355 C6orf229H3BNL8 230 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 CTAGE5O15320 804 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 HIBADHP31937 336 aaKnown RBP16.41■□□□□ 0.22
NME1-209ENST00000511355 FKBP4Q02790 459 aaKnown RBP eCLIP16.41■□□□□ 0.22
NME1-209ENST00000511355 RASGRF1Q13972 1273 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 SCARF1Q14162 830 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 NOLC1Q14978 699 aaKnown RBP eCLIP16.41■□□□□ 0.22
NME1-209ENST00000511355 ZNF804AQ7Z570 1209 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 GTF3C6Q969F1 213 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 EYA3Q99504 573 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
NME1-209ENST00000511355 PAG1Q9NWQ8 432 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 PDS5AQ29RF7 1337 aaKnown RBP16.41■□□□□ 0.22
NME1-209ENST00000511355 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 GOLGA6L4A6NEF3 574 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
NME1-209ENST00000511355 TTC6Q86TZ1 520 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 TXNRD3Q86VQ6 643 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 DNAJC5GQ8N7S2 189 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 MYRIPQ8NFW9 859 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
NME1-209ENST00000511355 UQCRHLA0A096LP55 91 aa16.4■□□□□ 0.22
NME1-209ENST00000511355 UQCRHP07919 91 aa16.4■□□□□ 0.22
NME1-209ENST00000511355 PRKCSHP14314 528 aaPredicted RBP16.4■□□□□ 0.22
NME1-209ENST00000511355 SPATA5Q8NB90 893 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms