RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SHTN1A0MZ66 631 aa15.12■□□□□ 0.01
HMGB2-205ENST00000511316 EYA2O00167 538 aa15.12■□□□□ 0.01
HMGB2-205ENST00000511316 GADD45BO75293 160 aaPredicted RBP15.12■□□□□ 0.01
HMGB2-205ENST00000511316 PODNQ7Z5L7 613 aa15.12■□□□□ 0.01
HMGB2-205ENST00000511316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.12■□□□□ 0.01
HMGB2-205ENST00000511316 TICAM2Q86XR7 235 aa15.12■□□□□ 0.01
HMGB2-205ENST00000511316 CHMP4CQ96CF2 233 aa15.12■□□□□ 0.01
HMGB2-205ENST00000511316 FUCA2Q9BTY2 467 aa15.12■□□□□ 0.01
HMGB2-205ENST00000511316 SNRKQ9NRH2 765 aa15.12■□□□□ 0.01
HMGB2-205ENST00000511316 PDE8BO95263 885 aa15.11■□□□□ 0.01
HMGB2-205ENST00000511316 UBE4AQ14139 1066 aa15.11■□□□□ 0.01
HMGB2-205ENST00000511316 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
HMGB2-205ENST00000511316 RUFY3Q7L099 469 aa15.11■□□□□ 0.01
HMGB2-205ENST00000511316 FAM200AQ8TCP9 573 aa15.11■□□□□ 0.01
HMGB2-205ENST00000511316 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
HMGB2-205ENST00000511316 MROH5Q6ZUA9 1318 aa15.11■□□□□ 0.01
HMGB2-205ENST00000511316 GMPSP49915 693 aaPredicted RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 SYCP1Q15431 976 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 FAM84BQ96KN1 310 aaPredicted RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 COA1Q9GZY4 146 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 GPRC5DQ9NZD1 345 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 CNPY2Q9Y2B0 182 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 CIAO1O76071 339 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 CASTP20810 708 aaKnown RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 OS9Q13438 667 aaPredicted RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 RBM46Q8TBY0 533 aaKnown RBP15.1■□□□□ 0.01
HMGB2-205ENST00000511316 CD209Q9NNX6 404 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 IL1RAPL2Q9NP60 686 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 HACL1Q9UJ83 578 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 SCN4AP35499 1836 aa15.1■□□□□ 0.01
HMGB2-205ENST00000511316 EGFRP00533 1210 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 IL1R1P14778 569 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 EPHX2P34913 555 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 RBM10P98175 930 aaKnown RBP15.09■□□□□ 0.01
HMGB2-205ENST00000511316 KRT32Q14532 448 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 TNIP1Q15025 636 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 MAP3K11Q16584 847 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 UTP14CQ5TAP6 766 aaKnown RBP15.09■□□□□ 0.01
HMGB2-205ENST00000511316 FBXO33Q7Z6M2 555 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 DPF2Q92785 391 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 MTMR6Q9Y217 621 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 RFX7Q2KHR2 1363 aa15.09■□□□□ 0.01
HMGB2-205ENST00000511316 IQCA1LA6NCM1 817 aa15.08■□□□□ 0.01
HMGB2-205ENST00000511316 IFIT2P09913 472 aaKnown RBP15.08■□□□□ 0.01
HMGB2-205ENST00000511316 GJB2P29033 226 aa15.08■□□□□ 0.01
HMGB2-205ENST00000511316 DACT2Q5SW24 774 aa15.08■□□□□ 0.01
HMGB2-205ENST00000511316 MXD3Q9BW11 206 aa15.08■□□□□ 0.01
HMGB2-205ENST00000511316 SIL1Q9H173 461 aa15.08■□□□□ 0.01
HMGB2-205ENST00000511316 ZNF646O15015 1829 aaPredicted RBP15.08■□□□□ 0
HMGB2-205ENST00000511316 DHX8Q14562 1220 aaKnown RBP15.08■□□□□ 0
HMGB2-205ENST00000511316 KIAA1524Q8TCG1 905 aa15.08■□□□□ 0
HMGB2-205ENST00000511316 CNOT7Q9UIV1 285 aaKnown RBP15.08■□□□□ 0
HMGB2-205ENST00000511316 ADAMTSL1Q8N6G6 1762 aa15.07■□□□□ 0
HMGB2-205ENST00000511316 FIBPO43427 364 aa15.07■□□□□ 0
HMGB2-205ENST00000511316 GYG1P46976 350 aa15.07■□□□□ 0
HMGB2-205ENST00000511316 METTL24Q5JXM2 366 aa15.07■□□□□ 0
HMGB2-205ENST00000511316 TDRD7Q8NHU6 1098 aaKnown RBP15.07■□□□□ 0
HMGB2-205ENST00000511316 JAKMIP1Q96N16 626 aaKnown RBP15.07■□□□□ 0
HMGB2-205ENST00000511316 NUP62CLQ9H1M0 184 aa15.07■□□□□ 0
HMGB2-205ENST00000511316 ZNF609O15014 1411 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 USP17L3A6NCW0 530 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 USP17L4A6NCW7 530 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 GOLGA6L4A6NEF3 574 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 NEMFO60524 1076 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 ITGBL1O95965 494 aaPredicted RBP15.06■□□□□ 0
HMGB2-205ENST00000511316 TSGA10IPQ3SY00 556 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 RSBN1LQ6PCB5 846 aaPredicted RBP15.06■□□□□ 0
HMGB2-205ENST00000511316 CWC27Q6UX04 472 aaKnown RBP15.06■□□□□ 0
HMGB2-205ENST00000511316 USP17L1Q7RTZ2 530 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 GDPD2Q9HCC8 539 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 PGAP2Q9UHJ9 254 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 SASH1O94885 1247 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 IL15P40933 162 aaPredicted RBP15.06■□□□□ 0
HMGB2-205ENST00000511316 NECTIN1Q15223 517 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 STRIP1Q5VSL9 837 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 TTLL5Q6EMB2 1281 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 PDCL2Q8N4E4 241 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 CERS5Q8N5B7 392 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 TRPM4Q8TD43 1214 aa15.06■□□□□ 0
HMGB2-205ENST00000511316 TCHHQ07283 1943 aa15.05■□□□□ 0
HMGB2-205ENST00000511316 RPS12P25398 132 aaKnown RBP15.05■□□□□ -0
HMGB2-205ENST00000511316 KCNJ4P48050 445 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 BCAMP50895 628 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 ZNF280AP59817 542 aaPredicted RBP15.05■□□□□ -0
HMGB2-205ENST00000511316 FSTL1Q12841 308 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 LARP1BQ659C4 914 aaKnown RBP15.05■□□□□ -0
HMGB2-205ENST00000511316 ATL3Q6DD88 541 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 SAMD7Q7Z3H4 446 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 MICALL2Q8IY33 904 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 RASEFQ8IZ41 740 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 AGBL3Q8NEM8 1001 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 MAP4K1Q92918 833 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 PSME4Q14997 1843 aa15.05■□□□□ -0
HMGB2-205ENST00000511316 CTAGE5O15320 804 aa15.04■□□□□ -0
HMGB2-205ENST00000511316 USP50Q70EL3 339 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms