RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.35■■■□□ 2.13
SNF8-209ENST00000510558 ELP3Q9H9T3 547 aa28.35■■■□□ 2.13
SNF8-209ENST00000510558 ABCF2Q9UG63 623 aa28.35■■■□□ 2.13
SNF8-209ENST00000510558 INHBEP58166 350 aa28.34■■■□□ 2.13
SNF8-209ENST00000510558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.34■■■□□ 2.133e-6■■■■■ 38.3
SNF8-209ENST00000510558 PANK1Q8TE04 598 aa28.34■■■□□ 2.13
SNF8-209ENST00000510558 MAP3K9P80192 1104 aa28.33■■■□□ 2.13
SNF8-209ENST00000510558 OS9Q13438 667 aaPredicted RBP28.33■■■□□ 2.13
SNF8-209ENST00000510558 DZIP1Q86YF9 867 aaKnown RBP28.33■■■□□ 2.13
SNF8-209ENST00000510558 HOOK2Q96ED9 719 aa28.33■■■□□ 2.13
SNF8-209ENST00000510558 VGLL4Q14135 290 aa28.32■■■□□ 2.12
SNF8-209ENST00000510558 SPTY2D1Q68D10 685 aaPredicted RBP28.32■■■□□ 2.12
SNF8-209ENST00000510558 IFNL1Q8IU54 200 aa28.32■■■□□ 2.12
SNF8-209ENST00000510558 FAM151AQ8WW52 585 aa28.32■■■□□ 2.12
SNF8-209ENST00000510558 OPTNQ96CV9 577 aa28.32■■■□□ 2.12
SNF8-209ENST00000510558 CFHR5Q9BXR6 569 aa28.32■■■□□ 2.12
SNF8-209ENST00000510558 USP40Q9NVE5 1235 aa28.32■■■□□ 2.12
SNF8-209ENST00000510558 HMG20BQ9P0W2 317 aa28.32■■■□□ 2.12
SNF8-209ENST00000510558 SURF6O75683 361 aaKnown RBP28.31■■■□□ 2.12
SNF8-209ENST00000510558 ALDH1A1P00352 501 aa28.31■■■□□ 2.12
SNF8-209ENST00000510558 ARID4AP29374 1257 aaPredicted RBP28.31■■■□□ 2.12
SNF8-209ENST00000510558 NFIAQ12857 509 aa28.31■■■□□ 2.12
SNF8-209ENST00000510558 GPR108Q9NPR9 543 aa28.31■■■□□ 2.12
SNF8-209ENST00000510558 CSADQ9Y600 493 aa28.31■■■□□ 2.12
SNF8-209ENST00000510558 GAKO14976 1311 aa28.31■■■□□ 2.12
SNF8-209ENST00000510558 TCP10Q12799 353 aa28.3■■■□□ 2.12
SNF8-209ENST00000510558 DCAF15Q66K64 600 aa28.3■■■□□ 2.12
SNF8-209ENST00000510558 SLF2Q8IX21 1173 aa28.3■■■□□ 2.12
SNF8-209ENST00000510558 ZNF296Q8WUU4 475 aaPredicted RBP28.3■■■□□ 2.12
SNF8-209ENST00000510558 GPR25O00155 361 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 IGF2BP3O00425 579 aaKnown RBP eCLIP28.29■■■□□ 2.12
SNF8-209ENST00000510558 TNNI3KQ59H18 835 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 NOM1Q5C9Z4 860 aaKnown RBP28.29■■■□□ 2.12
SNF8-209ENST00000510558 PI16Q6UXB8 463 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 ERICH6Q7L0X2 663 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 SPATA5Q8NB90 893 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 CNKSR2Q8WXI2 1034 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 FAM198AQ9UFP1 575 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 NOP58Q9Y2X3 529 aaKnown RBP28.29■■■□□ 2.12
SNF8-209ENST00000510558 FPGT-TNNI3KV9GXZ4 949 aa28.29■■■□□ 2.12
SNF8-209ENST00000510558 CCDC85CA6NKD9 419 aa28.28■■■□□ 2.12
SNF8-209ENST00000510558 UQCRFS1P1P0C7P4 283 aa28.28■■■□□ 2.12
SNF8-209ENST00000510558 MS4A1P11836 297 aa28.28■■■□□ 2.12
SNF8-209ENST00000510558 CTU1Q7Z7A3 348 aaKnown RBP28.28■■■□□ 2.12
SNF8-209ENST00000510558 WRNIP1Q96S55 665 aa28.28■■■□□ 2.12
SNF8-209ENST00000510558 R3HDMLQ9H3Y0 253 aa28.28■■■□□ 2.12
SNF8-209ENST00000510558 DOCK2Q92608 1830 aa28.27■■■□□ 2.12
SNF8-209ENST00000510558 CEP85Q6P2H3 762 aa28.27■■■□□ 2.12
SNF8-209ENST00000510558 FAM163AQ96GL9 167 aaPredicted RBP28.27■■■□□ 2.12
SNF8-209ENST00000510558 MROH7-TTC4A0A0A0MT08 1334 aa28.26■■■□□ 2.11
SNF8-209ENST00000510558 MCAMP43121 646 aa28.26■■■□□ 2.11
SNF8-209ENST00000510558 MECOMQ03112 1051 aa28.26■■■□□ 2.11
SNF8-209ENST00000510558 MIGA2Q7L4E1 593 aa28.26■■■□□ 2.11
SNF8-209ENST00000510558 ZNF341Q9BYN7 854 aa28.26■■■□□ 2.11
SNF8-209ENST00000510558 SNCAIPQ9Y6H5 919 aa28.26■■■□□ 2.11
SNF8-209ENST00000510558 TESPA1A2RU30 521 aaPredicted RBP28.25■■■□□ 2.11
SNF8-209ENST00000510558 TBC1D9Q6ZT07 1266 aa28.25■■■□□ 2.11
SNF8-209ENST00000510558 ZKSCAN4Q969J2 545 aaPredicted RBP28.25■■■□□ 2.11
SNF8-209ENST00000510558 OTUD5Q96G74 571 aa28.25■■■□□ 2.11
SNF8-209ENST00000510558 DBNDD2Q9BQY9 259 aa28.25■■■□□ 2.11
SNF8-209ENST00000510558 RFX7Q2KHR2 1363 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 SPDYE5A6NIY4 337 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 BTDP43251 543 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 OTUD7BQ6GQQ9 843 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 ZNF384Q8TF68 577 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 MS4A4AQ96JQ5 239 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 IDI2Q9BXS1 227 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 RCAN3Q9UKA8 241 aa28.24■■■□□ 2.11
SNF8-209ENST00000510558 FKTNO75072 461 aa28.23■■■□□ 2.11
SNF8-209ENST00000510558 RGS3P49796 1198 aa28.23■■■□□ 2.11
SNF8-209ENST00000510558 TTC39AQ5SRH9 613 aa28.23■■■□□ 2.11
SNF8-209ENST00000510558 ZFPM1Q8IX07 1006 aa28.23■■■□□ 2.11
SNF8-209ENST00000510558 PTPN18Q99952 460 aa28.23■■■□□ 2.11
SNF8-209ENST00000510558 ENTPD3O75355 529 aa28.22■■■□□ 2.11
SNF8-209ENST00000510558 GTF2A2P52657 109 aa28.22■■■□□ 2.11
SNF8-209ENST00000510558 CCDC158Q5M9N0 1113 aa28.22■■■□□ 2.11
SNF8-209ENST00000510558 ERO1BQ86YB8 467 aa28.22■■■□□ 2.11
SNF8-209ENST00000510558 NSUN4Q96CB9 384 aaKnown RBP28.22■■■□□ 2.11
SNF8-209ENST00000510558 MAST2Q6P0Q8 1798 aa28.22■■■□□ 2.11
SNF8-209ENST00000510558 GPR75-ASB3A0A0A6YYF3 556 aa28.21■■■□□ 2.11
SNF8-209ENST00000510558 INPP5BP32019 993 aa28.21■■■□□ 2.11
SNF8-209ENST00000510558 GSTO1P78417 241 aa28.21■■■□□ 2.11
SNF8-209ENST00000510558 BRI3BPQ8WY22 251 aa28.21■■■□□ 2.11
SNF8-209ENST00000510558 RAI14Q9P0K7 980 aa28.21■■■□□ 2.11
SNF8-209ENST00000510558 MYO5AQ9Y4I1 1855 aaKnown RBP28.21■■■□□ 2.11
SNF8-209ENST00000510558 CCL15-CCL14A0A0B4J2E2 113 aa28.2■■■□□ 2.1
SNF8-209ENST00000510558 WDHD1O75717 1129 aaPredicted RBP28.2■■■□□ 2.1
SNF8-209ENST00000510558 LDHCP07864 332 aa28.2■■■□□ 2.1
SNF8-209ENST00000510558 CCL15Q16663 113 aa28.2■■■□□ 2.1
SNF8-209ENST00000510558 SNRKQ9NRH2 765 aa28.2■■■□□ 2.1
SNF8-209ENST00000510558 ZNF112Q9UJU3 913 aa28.2■■■□□ 2.1
SNF8-209ENST00000510558 COG6Q9Y2V7 657 aa28.2■■■□□ 2.1
SNF8-209ENST00000510558 CRHR2Q13324 411 aa28.19■■■□□ 2.1
SNF8-209ENST00000510558 DDX4Q9NQI0 724 aaKnown RBP28.19■■■□□ 2.1
SNF8-209ENST00000510558 LRP2BPQ9P2M1 347 aa28.19■■■□□ 2.1
SNF8-209ENST00000510558 DBNLQ9UJU6 430 aaKnown RBP28.19■■■□□ 2.1
SNF8-209ENST00000510558 DDX19BQ9UMR2 479 aa28.19■■■□□ 2.1
SNF8-209ENST00000510558 EXOC6BQ9Y2D4 811 aa28.19■■■□□ 2.1
SNF8-209ENST00000510558 RHBDL3P58872 404 aa28.18■■■□□ 2.1
SNF8-209ENST00000510558 ZSCAN29Q8IWY8 852 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms