RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SLC5A1P13866 664 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 INPP5BP32019 993 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 PSMC4P43686 418 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 FXR1P51114 621 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX41-211ENST00000510171 TCP10Q12799 353 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 ANKRD23Q86SG2 305 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.04□□□□□ -0.32
DDX41-211ENST00000510171 LPIN2Q92539 896 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 USP44Q9H0E7 712 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 CPA4Q9UI42 421 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 PTPRCP08575 1304 aa13.04□□□□□ -0.32
DDX41-211ENST00000510171 H0YGN5 161 aa13.03□□□□□ -0.32
DDX41-211ENST00000510171 EYA2O00167 538 aa13.03□□□□□ -0.32
DDX41-211ENST00000510171 FMNL1O95466 1100 aaPredicted RBP13.03□□□□□ -0.32
DDX41-211ENST00000510171 CDC42EP5Q6NZY7 148 aa13.03□□□□□ -0.32
DDX41-211ENST00000510171 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
DDX41-211ENST00000510171 RAET1EQ8TD07 263 aa13.02□□□□□ -0.33
DDX41-211ENST00000510171 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
DDX41-211ENST00000510171 USP40Q9NVE5 1235 aa13.02□□□□□ -0.33
DDX41-211ENST00000510171 KCNH4Q9UQ05 1017 aa13.02□□□□□ -0.33
DDX41-211ENST00000510171 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.33
DDX41-211ENST00000510171 RPAP1Q9BWH6 1393 aaPredicted RBP13.02□□□□□ -0.33
DDX41-211ENST00000510171 CXCL11O14625 94 aa13.01□□□□□ -0.33
DDX41-211ENST00000510171 OSBPP22059 807 aa13.01□□□□□ -0.33
DDX41-211ENST00000510171 CTGFP29279 349 aa13.01□□□□□ -0.33
DDX41-211ENST00000510171 RFX5P48382 616 aaPredicted RBP13.01□□□□□ -0.33
DDX41-211ENST00000510171 MTFR1Q15390 333 aa13.01□□□□□ -0.33
DDX41-211ENST00000510171 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
DDX41-211ENST00000510171 DPF3Q92784 378 aa13.01□□□□□ -0.33
DDX41-211ENST00000510171 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
DDX41-211ENST00000510171 HTTP42858 3142 aa13□□□□□ -0.33
DDX41-211ENST00000510171 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
DDX41-211ENST00000510171 ZNF521Q96K83 1311 aa13□□□□□ -0.33
DDX41-211ENST00000510171 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
DDX41-211ENST00000510171 GRK4P32298 578 aa13□□□□□ -0.33
DDX41-211ENST00000510171 NFIAQ12857 509 aa13□□□□□ -0.33
DDX41-211ENST00000510171 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
DDX41-211ENST00000510171 NOL9Q5SY16 702 aaKnown RBP13□□□□□ -0.33
DDX41-211ENST00000510171 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
DDX41-211ENST00000510171 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
DDX41-211ENST00000510171 BIN2Q9UBW5 565 aaPredicted RBP13□□□□□ -0.33
DDX41-211ENST00000510171 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
DDX41-211ENST00000510171 MYPNQ86TC9 1320 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 GJB1P08034 283 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 PRDX5P30044 214 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 FCGRTP55899 365 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 MOGSQ13724 837 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 ZFPM1Q8IX07 1006 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 PARK7Q99497 189 aaKnown RBP12.99□□□□□ -0.33
DDX41-211ENST00000510171 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 CACNA1FO60840 1977 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 LAMB1P07942 1786 aa12.99□□□□□ -0.33
DDX41-211ENST00000510171 KIAA0100Q14667 2235 aaKnown RBP12.98□□□□□ -0.33
DDX41-211ENST00000510171 ADGRA2Q96PE1 1338 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 E9PSI1 815 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 CIAO1O76071 339 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 CYP2C8P10632 490 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 CCL5P13501 91 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 GJA8P48165 433 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 UBXN2AP68543 259 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 FASTKD5Q7L8L6 764 aaKnown RBP12.98□□□□□ -0.33
DDX41-211ENST00000510171 SHISA4Q96DD7 197 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 RNF208Q9H0X6 261 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 SIL1Q9H173 461 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 PICK1Q9NRD5 415 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 DENND2AQ9ULE3 1009 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 ZHX2Q9Y6X8 837 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
DDX41-211ENST00000510171 SALL1Q9NSC2 1324 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 PHF20L1A8MW92 1017 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 SEMA3EO15041 775 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
DDX41-211ENST00000510171 BCRP11274 1271 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 PRKCZQ05513 592 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 HTATIP2Q9BUP3 242 aa12.97□□□□□ -0.33
DDX41-211ENST00000510171 MKI67P46013 3256 aaKnown RBP12.97□□□□□ -0.33
DDX41-211ENST00000510171 OTOFQ9HC10 1997 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 ENTPD3O75355 529 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 PTPRAP18433 802 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
DDX41-211ENST00000510171 PHKA1P46020 1223 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 ZSCAN29Q8IWY8 852 aaPredicted RBP12.96□□□□□ -0.33
DDX41-211ENST00000510171 ZGPATQ8N5A5 531 aaKnown RBP12.96□□□□□ -0.33
DDX41-211ENST00000510171 SLAIN1Q8ND83 568 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 IDI2Q9BXS1 227 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 HDAC5Q9UQL6 1122 aa12.96□□□□□ -0.33
DDX41-211ENST00000510171 A0A0G2JLL6 359 aaPredicted RBP12.95□□□□□ -0.34
DDX41-211ENST00000510171 RGS3P49796 1198 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 GADL1Q6ZQY3 521 aa12.95□□□□□ -0.34
DDX41-211ENST00000510171 PRRT2Q7Z6L0 340 aaPredicted RBP12.95□□□□□ -0.34
DDX41-211ENST00000510171 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms