RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-204ENST00000509994 MIGA2Q7L4E1 593 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 FAM83AQ86UY5 434 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 ZGPATQ8N5A5 531 aaKnown RBP12.56□□□□□ -0.4
SCARB2-204ENST00000509994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCARB2-204ENST00000509994 CD99L2Q8TCZ2 262 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-204ENST00000509994 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 CFHR5Q9BXR6 569 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 ZNF341Q9BYN7 854 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 DAGLAQ9Y4D2 1042 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 SEMA3EO15041 775 aa12.55□□□□□ -0.4
SCARB2-204ENST00000509994 INTS3Q68E01 1043 aaKnown RBP12.55□□□□□ -0.4
SCARB2-204ENST00000509994 CDC42EP5Q6NZY7 148 aa12.55□□□□□ -0.4
SCARB2-204ENST00000509994 ZSCAN29Q8IWY8 852 aaPredicted RBP12.55□□□□□ -0.4
SCARB2-204ENST00000509994 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
SCARB2-204ENST00000509994 ZFYVE28Q9HCC9 887 aa12.55□□□□□ -0.4
SCARB2-204ENST00000509994 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
SCARB2-204ENST00000509994 AKAP2Q9Y2D5 859 aa12.55□□□□□ -0.4
SCARB2-204ENST00000509994 A0A1B0GUL7 405 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 BCAR3O75815 825 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 GNAI2P04899 355 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 CETPP11597 493 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 SP3Q02447 781 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 TFCP2Q12800 502 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 OS9Q13438 667 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-204ENST00000509994 MVPQ14764 893 aaKnown RBP12.54□□□□□ -0.4
SCARB2-204ENST00000509994 FKBP1CQ5VVH2 108 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 OTOP1Q7RTM1 612 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 ERO1BQ86YB8 467 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 SLF2Q8IX21 1173 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
SCARB2-204ENST00000509994 BRI3BPQ8WY22 251 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 MRIQ9BWK5 157 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 EFCC1Q9HA90 598 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-204ENST00000509994 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
SCARB2-204ENST00000509994 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 ECM2O94769 699 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-204ENST00000509994 TRIM27P14373 513 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 TIMM10P62072 90 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 G3BP1Q13283 466 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCARB2-204ENST00000509994 SNAPC2Q13487 334 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 SPTY2D1Q68D10 685 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-204ENST00000509994 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 PTPN18Q99952 460 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 SNCAIPQ9Y6H5 919 aa12.53□□□□□ -0.4
SCARB2-204ENST00000509994 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-204ENST00000509994 INPP5BP32019 993 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 NFIAQ12857 509 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 PICALMQ13492 652 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 RASGRF1Q13972 1273 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 KIF22Q14807 665 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 ERICH6Q7L0X2 663 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-204ENST00000509994 XAGE2Q96GT9 111 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 SALL1Q9NSC2 1324 aa12.52□□□□□ -0.41
SCARB2-204ENST00000509994 IRF6O14896 467 aa12.51□□□□□ -0.41
SCARB2-204ENST00000509994 RGS3P49796 1198 aa12.51□□□□□ -0.41
SCARB2-204ENST00000509994 PPIL2Q13356 520 aa12.51□□□□□ -0.41
SCARB2-204ENST00000509994 FAM43AQ8N2R8 423 aa12.51□□□□□ -0.41
SCARB2-204ENST00000509994 BTBD19C9JJ37 291 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 BTDP43251 543 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
SCARB2-204ENST00000509994 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 TMEM57Q8N5G2 664 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 NOL10Q9BSC4 688 aaKnown RBP12.5□□□□□ -0.41
SCARB2-204ENST00000509994 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 PTPN22Q9Y2R2 807 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 ZSWIM8A7E2V4 1837 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 HTTP42858 3142 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 CENPFP49454 3210 aa12.5□□□□□ -0.41
SCARB2-204ENST00000509994 DOCK1Q14185 1865 aa12.49□□□□□ -0.41
SCARB2-204ENST00000509994 MROH7-TTC4A0A0A0MT08 1334 aa12.49□□□□□ -0.41
SCARB2-204ENST00000509994 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-204ENST00000509994 GSTO1P78417 241 aa12.49□□□□□ -0.41
SCARB2-204ENST00000509994 PPATQ06203 517 aa12.49□□□□□ -0.41
SCARB2-204ENST00000509994 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
SCARB2-204ENST00000509994 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
SCARB2-204ENST00000509994 MIER1Q8N108 512 aa12.49□□□□□ -0.41
SCARB2-204ENST00000509994 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 MECOMQ03112 1051 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 MTX1Q13505 466 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 PI16Q6UXB8 463 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 ZFPM1Q8IX07 1006 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 SPATA5Q8NB90 893 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 C1orf115Q9H7X2 142 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 LRP2BPQ9P2M1 347 aa12.48□□□□□ -0.41
SCARB2-204ENST00000509994 GAKO14976 1311 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms