RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 PPP4CP60510 307 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 ADGRA1Q86SQ6 560 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 CERS3Q8IU89 383 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 DAGLAQ9Y4D2 1042 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 GAKO14976 1311 aa16.63■□□□□ 0.25
CYSTM1-204ENST00000509789 MYH7P12883 1935 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 REC8O95072 547 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 PLCG2P16885 1265 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 BTDP43251 543 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 ZNF280AP59817 542 aaPredicted RBP16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 DLGAP5Q15398 846 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 CFAP100Q494V2 611 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 ZDHHC15Q96MV8 337 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 AATFQ9NY61 560 aaKnown RBP eCLIP16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 CCDC171Q6TFL3 1326 aa16.62■□□□□ 0.25
CYSTM1-204ENST00000509789 GLTPD2A6NH11 291 aa16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 GPAA1O43292 621 aa16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 GNAT2P19087 354 aa16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 LMOD1P29536 600 aaPredicted RBP16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 CCDC129Q6ZRS4 1044 aa16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 GPRC5DQ9NZD1 345 aa16.61■□□□□ 0.25
CYSTM1-204ENST00000509789 APOBEC3HQ6NTF7 200 aaKnown RBP16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 MTMR14Q8NCE2 650 aa16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 RIOK1Q9BRS2 568 aaKnown RBP16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 BACH2Q9BYV9 841 aa16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
CYSTM1-204ENST00000509789 APPP05067 770 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 IL25Q9H293 177 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 SLC4A4Q9Y6R1 1079 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
CYSTM1-204ENST00000509789 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
CYSTM1-204ENST00000509789 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
CYSTM1-204ENST00000509789 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
CYSTM1-204ENST00000509789 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.24
CYSTM1-204ENST00000509789 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
CYSTM1-204ENST00000509789 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
CYSTM1-204ENST00000509789 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
CYSTM1-204ENST00000509789 PATL2C9JE40 543 aaKnown RBP16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 MYO1BO43795 1136 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 SEC24BO95487 1268 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 EPS15P42566 896 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 TBC1D10BQ4KMP7 808 aaPredicted RBP16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 CDC42EP5Q6NZY7 148 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 DDRGK1Q96HY6 314 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 DSCC1Q9BVC3 393 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 LSG1Q9H089 658 aaKnown RBP16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 PCDHAC2Q9Y5I4 1007 aa16.57■□□□□ 0.24
CYSTM1-204ENST00000509789 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 PRKAB2O43741 272 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 HSPD1P10809 573 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 USP5P45974 858 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 RHBDL3P58872 404 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 VPS53Q5VIR6 699 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 SAMD7Q7Z3H4 446 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 ZBED3Q96IU2 234 aaPredicted RBP16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 TDRD3Q9H7E2 651 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 ADARB2Q9NS39 739 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 TMOD2Q9NZR1 351 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 HACL1Q9UJ83 578 aa16.56■□□□□ 0.24
CYSTM1-204ENST00000509789 IQCA1LA6NCM1 817 aa16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 WNT10BO00744 389 aa16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 PTH1RQ03431 593 aa16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 MAP4K1Q92918 833 aa16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
CYSTM1-204ENST00000509789 ALX1Q15699 326 aa16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 GIMAP6Q6P9H5 292 aa16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 IFNL3Q8IZI9 196 aa16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 TGFBRAP1Q8WUH2 860 aa16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 SDR42E1Q8WUS8 393 aa16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 ZNF70Q9UC06 446 aaPredicted RBP16.54■□□□□ 0.24
CYSTM1-204ENST00000509789 MCCP23508 829 aa16.53■□□□□ 0.24
CYSTM1-204ENST00000509789 TDO2P48775 406 aa16.53■□□□□ 0.24
CYSTM1-204ENST00000509789 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
CYSTM1-204ENST00000509789 MAPKAPK5Q8IW41 473 aa16.53■□□□□ 0.24
CYSTM1-204ENST00000509789 IDI2Q9BXS1 227 aa16.53■□□□□ 0.24
CYSTM1-204ENST00000509789 NAPBQ9H115 298 aa16.53■□□□□ 0.24
CYSTM1-204ENST00000509789 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms