RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ECM2O94769 699 aaPredicted RBP19.96■□□□□ 0.79
RAB40C-202ENST00000509637 IFIT1P09914 478 aaKnown RBP19.96■□□□□ 0.79
RAB40C-202ENST00000509637 ZNF112Q9UJU3 913 aa19.96■□□□□ 0.79
RAB40C-202ENST00000509637 PA2G4Q9UQ80 394 aaKnown RBP19.96■□□□□ 0.79
RAB40C-202ENST00000509637 SUGT1Q9Y2Z0 365 aa19.96■□□□□ 0.79
RAB40C-202ENST00000509637 TLR2O60603 784 aa19.95■□□□□ 0.78
RAB40C-202ENST00000509637 ADORA1P30542 326 aa19.95■□□□□ 0.78
RAB40C-202ENST00000509637 PHKA1P46020 1223 aa19.95■□□□□ 0.78
RAB40C-202ENST00000509637 TCP10Q12799 353 aa19.95■□□□□ 0.78
RAB40C-202ENST00000509637 LPIN2Q92539 896 aa19.95■□□□□ 0.78
RAB40C-202ENST00000509637 SIL1Q9H173 461 aa19.95■□□□□ 0.78
RAB40C-202ENST00000509637 PPIL2Q13356 520 aa19.94■□□□□ 0.78
RAB40C-202ENST00000509637 C17orf99Q6UX52 265 aa19.94■□□□□ 0.78
RAB40C-202ENST00000509637 FAM151AQ8WW52 585 aa19.94■□□□□ 0.78
RAB40C-202ENST00000509637 PCDH10Q9P2E7 1040 aa19.94■□□□□ 0.78
RAB40C-202ENST00000509637 ADGRA2Q96PE1 1338 aa19.94■□□□□ 0.78
RAB40C-202ENST00000509637 RPAP1Q9BWH6 1393 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-202ENST00000509637 MYCP01106 439 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-202ENST00000509637 CETPP11597 493 aa19.93■□□□□ 0.78
RAB40C-202ENST00000509637 SLC5A1P13866 664 aa19.93■□□□□ 0.78
RAB40C-202ENST00000509637 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-202ENST00000509637 SH3TC2Q8TF17 1288 aa19.93■□□□□ 0.78
RAB40C-202ENST00000509637 MYH13Q9UKX3 1938 aa19.93■□□□□ 0.78
RAB40C-202ENST00000509637 LACTBP83111 547 aaPredicted RBP19.92■□□□□ 0.78
RAB40C-202ENST00000509637 ALDH1L2Q3SY69 923 aa19.92■□□□□ 0.78
RAB40C-202ENST00000509637 SH3BP5LQ7L8J4 393 aa19.92■□□□□ 0.78
RAB40C-202ENST00000509637 WDR66Q8TBY9 1149 aa19.92■□□□□ 0.78
RAB40C-202ENST00000509637 CPA4Q9UI42 421 aa19.92■□□□□ 0.78
RAB40C-202ENST00000509637 NOB1Q9ULX3 412 aaKnown RBP19.92■□□□□ 0.78
RAB40C-202ENST00000509637 ATRNL1Q5VV63 1379 aa19.92■□□□□ 0.78
RAB40C-202ENST00000509637 SNAPC2Q13487 334 aa19.91■□□□□ 0.78
RAB40C-202ENST00000509637 HABP4Q5JVS0 413 aaKnown RBP19.91■□□□□ 0.78
RAB40C-202ENST00000509637 ZNF341Q9BYN7 854 aa19.91■□□□□ 0.78
RAB40C-202ENST00000509637 SMC4Q9NTJ3 1288 aa19.91■□□□□ 0.78
RAB40C-202ENST00000509637 TMOD2Q9NZR1 351 aa19.91■□□□□ 0.78
RAB40C-202ENST00000509637 KCNH4Q9UQ05 1017 aa19.91■□□□□ 0.78
RAB40C-202ENST00000509637 LRRFIP2Q9Y608 721 aaKnown RBP19.91■□□□□ 0.78
RAB40C-202ENST00000509637 PHF20L1A8MW92 1017 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 CIAO1O76071 339 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-202ENST00000509637 PPATQ06203 517 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 ATP2B3Q16720 1220 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 GPAT2Q6NUI2 795 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 ZNF384Q8TF68 577 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 MEIS3Q99687 375 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 MAST3O60307 1309 aa19.9■□□□□ 0.78
RAB40C-202ENST00000509637 MTFR1Q15390 333 aa19.89■□□□□ 0.77
RAB40C-202ENST00000509637 SLC9C1Q4G0N8 1177 aa19.89■□□□□ 0.77
RAB40C-202ENST00000509637 TRIM47Q96LD4 638 aa19.89■□□□□ 0.77
RAB40C-202ENST00000509637 ZCCHC17Q9NP64 241 aaKnown RBP19.89■□□□□ 0.77
RAB40C-202ENST00000509637 USP40Q9NVE5 1235 aa19.89■□□□□ 0.77
RAB40C-202ENST00000509637 TNNQ9UQP3 1299 aa19.89■□□□□ 0.77
RAB40C-202ENST00000509637 AK9Q5TCS8 1911 aa19.88■□□□□ 0.77
RAB40C-202ENST00000509637 TIMM10P62072 90 aa19.88■□□□□ 0.77
RAB40C-202ENST00000509637 DCAF15Q66K64 600 aa19.88■□□□□ 0.77
RAB40C-202ENST00000509637 DDX4Q9NQI0 724 aaKnown RBP19.88■□□□□ 0.77
RAB40C-202ENST00000509637 CEP126Q9P2H0 1117 aa19.88■□□□□ 0.77
RAB40C-202ENST00000509637 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-202ENST00000509637 RFX7Q2KHR2 1363 aa19.87■□□□□ 0.77
RAB40C-202ENST00000509637 SALL1Q9NSC2 1324 aa19.87■□□□□ 0.77
RAB40C-202ENST00000509637 PDHXO00330 501 aa19.87■□□□□ 0.77
RAB40C-202ENST00000509637 UBTFL1P0CB47 393 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-202ENST00000509637 NOL9Q5SY16 702 aaKnown RBP19.87■□□□□ 0.77
RAB40C-202ENST00000509637 CCDC102BQ68D86 513 aa19.87■□□□□ 0.77
RAB40C-202ENST00000509637 ANKRD23Q86SG2 305 aa19.87■□□□□ 0.77
RAB40C-202ENST00000509637 SHISA4Q96DD7 197 aa19.87■□□□□ 0.77
RAB40C-202ENST00000509637 COPRSQ9NQ92 184 aa19.87■□□□□ 0.77
RAB40C-202ENST00000509637 MYH2Q9UKX2 1941 aa19.86■□□□□ 0.77
RAB40C-202ENST00000509637 GAKO14976 1311 aa19.86■□□□□ 0.77
RAB40C-202ENST00000509637 DDTLA6NHG4 134 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-202ENST00000509637 LDHBP07195 334 aaKnown RBP19.86■□□□□ 0.77
RAB40C-202ENST00000509637 RASGRF1Q13972 1273 aa19.86■□□□□ 0.77
RAB40C-202ENST00000509637 FBXO3Q9UK99 471 aa19.86■□□□□ 0.77
RAB40C-202ENST00000509637 WDHD1O75717 1129 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-202ENST00000509637 OSBPP22059 807 aa19.85■□□□□ 0.77
RAB40C-202ENST00000509637 PSMC4P43686 418 aa19.85■□□□□ 0.77
RAB40C-202ENST00000509637 RGS3P49796 1198 aa19.85■□□□□ 0.77
RAB40C-202ENST00000509637 MAP3K10Q02779 954 aa19.85■□□□□ 0.77
RAB40C-202ENST00000509637 CCDC84Q86UT8 332 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-202ENST00000509637 TMEM106CQ9BVX2 250 aa19.85■□□□□ 0.77
RAB40C-202ENST00000509637 ZBTB22O15209 634 aa19.84■□□□□ 0.77
RAB40C-202ENST00000509637 CYP2C8P10632 490 aa19.84■□□□□ 0.77
RAB40C-202ENST00000509637 BCRP11274 1271 aa19.84■□□□□ 0.77
RAB40C-202ENST00000509637 IDI2Q9BXS1 227 aa19.84■□□□□ 0.77
RAB40C-202ENST00000509637 SRRDQ9UH36 339 aa19.84■□□□□ 0.77
RAB40C-202ENST00000509637 IL15P40933 162 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-202ENST00000509637 RARSP54136 660 aaKnown RBP19.83■□□□□ 0.77
RAB40C-202ENST00000509637 SLC4A8Q2Y0W8 1093 aa19.83■□□□□ 0.77
RAB40C-202ENST00000509637 HOOK2Q96ED9 719 aa19.83■□□□□ 0.77
RAB40C-202ENST00000509637 DENND2AQ9ULE3 1009 aa19.83■□□□□ 0.77
RAB40C-202ENST00000509637 GABRQQ9UN88 632 aa19.83■□□□□ 0.77
RAB40C-202ENST00000509637 PHIPQ8WWQ0 1821 aa19.83■□□□□ 0.76
RAB40C-202ENST00000509637 RHBDL3P58872 404 aa19.82■□□□□ 0.76
RAB40C-202ENST00000509637 TFCP2Q12800 502 aa19.82■□□□□ 0.76
RAB40C-202ENST00000509637 PI16Q6UXB8 463 aa19.82■□□□□ 0.76
RAB40C-202ENST00000509637 NBPF11Q86T75 865 aa19.82■□□□□ 0.76
RAB40C-202ENST00000509637 COLQQ9Y215 455 aaPredicted RBP19.82■□□□□ 0.76
RAB40C-202ENST00000509637 AFG3L2Q9Y4W6 797 aa19.82■□□□□ 0.76
RAB40C-202ENST00000509637 SEMA3EO15041 775 aa19.81■□□□□ 0.76
RAB40C-202ENST00000509637 PTPRAP18433 802 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms