RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 PDGFAP04085 211 aa6.09□□□□□ -1.43
OTUD4-207ENST00000509517 MZF1P28698 734 aaPredicted RBP6.09□□□□□ -1.43
OTUD4-207ENST00000509517 DNM1Q05193 864 aaKnown RBP6.09□□□□□ -1.43
OTUD4-207ENST00000509517 TMEM102Q8N9M5 508 aaPredicted RBP6.09□□□□□ -1.43
OTUD4-207ENST00000509517 FAM181AQ8N9Y4 354 aa6.09□□□□□ -1.43
OTUD4-207ENST00000509517 BSNDQ8WZ55 320 aa6.09□□□□□ -1.43
OTUD4-207ENST00000509517 NUDT16Q96DE0 195 aaKnown RBP6.09□□□□□ -1.43
OTUD4-207ENST00000509517 CHRDQ9H2X0 955 aa6.09□□□□□ -1.43
OTUD4-207ENST00000509517 ACSS3Q9H6R3 686 aa6.09□□□□□ -1.43
OTUD4-207ENST00000509517 ZNF503-AS2A6NEH8 195 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 LRRC10BA6NIK2 292 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 ESRRAP11474 423 aaPredicted RBP6.08□□□□□ -1.44
OTUD4-207ENST00000509517 CES1P23141 567 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 GSTM4Q03013 218 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 AAMPQ13685 434 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 OGFOD3Q6PK18 319 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 OSMRQ99650 979 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 ZKSCAN3Q9BRR0 538 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 GGNBP2Q9H3C7 697 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 CCDC87Q9NVE4 849 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 LMCD1Q9NZU5 365 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 POLIQ9UNA4 740 aa6.08□□□□□ -1.44
OTUD4-207ENST00000509517 RAP1GAPP47736 663 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 CYP27A1Q02318 531 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 MAP7Q14244 749 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 MLANAQ16655 118 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 PDE12Q6L8Q7 609 aaKnown RBP6.07□□□□□ -1.44
OTUD4-207ENST00000509517 TTLL10Q6ZVT0 673 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 DYMQ7RTS9 669 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 ZNF438Q7Z4V0 828 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 LRRC56Q8IYG6 542 aaPredicted RBP6.07□□□□□ -1.44
OTUD4-207ENST00000509517 YIPF2Q9BWQ6 316 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 CRIM1Q9NZV1 1036 aa6.07□□□□□ -1.44
OTUD4-207ENST00000509517 BIN2Q9UBW5 565 aaPredicted RBP6.07□□□□□ -1.44
OTUD4-207ENST00000509517 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.06□□□□□ -1.44
OTUD4-207ENST00000509517 ECEL1O95672 775 aa6.06□□□□□ -1.44
OTUD4-207ENST00000509517 RPLP1P05386 114 aaKnown RBP6.06□□□□□ -1.44
OTUD4-207ENST00000509517 PCSK2P16519 638 aa6.06□□□□□ -1.44
OTUD4-207ENST00000509517 STK11IPQ8N1F8 1099 aa6.06□□□□□ -1.44
OTUD4-207ENST00000509517 PI4K2BQ8TCG2 481 aa6.06□□□□□ -1.44
OTUD4-207ENST00000509517 PRDM7Q9NQW5 492 aa6.06□□□□□ -1.44
OTUD4-207ENST00000509517 BRPF3Q9ULD4 1205 aa6.06□□□□□ -1.44
OTUD4-207ENST00000509517 METTL12A8MUP2 240 aa6.05□□□□□ -1.44
OTUD4-207ENST00000509517 NDUFB5O43674 189 aa6.05□□□□□ -1.44
OTUD4-207ENST00000509517 KRT1P04264 644 aa6.05□□□□□ -1.44
OTUD4-207ENST00000509517 ZSCAN22P10073 491 aaPredicted RBP6.05□□□□□ -1.44
OTUD4-207ENST00000509517 USP5P45974 858 aa6.05□□□□□ -1.44
OTUD4-207ENST00000509517 SND1Q7KZF4 910 aaKnown RBP eCLIP6.05□□□□□ -1.44
OTUD4-207ENST00000509517 GJD3Q8N144 294 aa6.05□□□□□ -1.44
OTUD4-207ENST00000509517 LIN37Q96GY3 246 aaPredicted RBP6.05□□□□□ -1.44
OTUD4-207ENST00000509517 TOX2Q96NM4 488 aa6.05□□□□□ -1.44
OTUD4-207ENST00000509517 SOX17Q9H6I2 414 aaPredicted RBP6.05□□□□□ -1.44
OTUD4-207ENST00000509517 JAG2Q9Y219 1238 aa6.05□□□□□ -1.44
OTUD4-207ENST00000509517 C8orf34Q49A92 452 aa6.04□□□□□ -1.44
OTUD4-207ENST00000509517 AKAP4Q5JQC9 854 aa6.04□□□□□ -1.44
OTUD4-207ENST00000509517 BHLHE22Q8NFJ8 381 aaPredicted RBP6.04□□□□□ -1.44
OTUD4-207ENST00000509517 ASAP3Q8TDY4 903 aa6.04□□□□□ -1.44
OTUD4-207ENST00000509517 DCTN4Q9UJW0 460 aa6.04□□□□□ -1.44
OTUD4-207ENST00000509517 DAGLAQ9Y4D2 1042 aa6.04□□□□□ -1.44
OTUD4-207ENST00000509517 EREGO14944 169 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 MAOBP27338 520 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 ASPAP45381 313 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 FYB2Q5VWT5 728 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 XKR5Q6UX68 686 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 NETO1Q8TDF5 533 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 FAM129BQ96TA1 746 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 RBCK1Q9BYM8 510 aa6.03□□□□□ -1.44
OTUD4-207ENST00000509517 ZBTB7CA1YPR0 619 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 EHHADHQ08426 723 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 ZNF423Q2M1K9 1284 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 SIAH1Q8IUQ4 282 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 TTC16Q8NEE8 873 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 MISP3Q96FF7 219 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 CITED4Q96RK1 184 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 GZF1Q9H116 711 aaPredicted RBP6.02□□□□□ -1.45
OTUD4-207ENST00000509517 GSX1Q9H4S2 264 aaPredicted RBP6.02□□□□□ -1.45
OTUD4-207ENST00000509517 LATS2Q9NRM7 1088 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 VAV3Q9UKW4 847 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 PLAGL2Q9UPG8 496 aa6.02□□□□□ -1.45
OTUD4-207ENST00000509517 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.01□□□□□ -1.45
OTUD4-207ENST00000509517 IGHA2P01877 340 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 FAM87AP0C7U9 286 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 C1QTNF9P0C862 333 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 MAPK1P28482 360 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 CDK5R2Q13319 367 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 PDE3BQ13370 1112 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 AOC3Q16853 763 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 PRR23BQ6ZRT6 265 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 ZSWIM9Q86XI8 627 aa6.01□□□□□ -1.45
OTUD4-207ENST00000509517 ZSCAN18Q8TBC5 510 aaPredicted RBP6.01□□□□□ -1.45
OTUD4-207ENST00000509517 GPR182O15218 404 aa6□□□□□ -1.45
OTUD4-207ENST00000509517 TNFRSF21O75509 655 aa6□□□□□ -1.45
OTUD4-207ENST00000509517 TSPAN15O95858 294 aa6□□□□□ -1.45
OTUD4-207ENST00000509517 PRKCQQ04759 706 aa6□□□□□ -1.45
OTUD4-207ENST00000509517 PEAR1Q5VY43 1037 aaPredicted RBP6□□□□□ -1.45
OTUD4-207ENST00000509517 SYDE1Q6ZW31 735 aaPredicted RBP6□□□□□ -1.45
OTUD4-207ENST00000509517 TMC7Q7Z402 723 aa6□□□□□ -1.45
OTUD4-207ENST00000509517 SNX29Q8TEQ0 813 aa6□□□□□ -1.45
OTUD4-207ENST00000509517 KCNK12Q9HB15 430 aa6□□□□□ -1.45
OTUD4-207ENST00000509517 PPP1R9AQ9ULJ8 1098 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms