RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SNRKQ9NRH2 765 aa19.82■□□□□ 0.76
PDLIM5-212ENST00000509333 UNCXA6NJT0 531 aa19.81■□□□□ 0.76
PDLIM5-212ENST00000509333 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
PDLIM5-212ENST00000509333 MECOMQ03112 1051 aa19.81■□□□□ 0.76
PDLIM5-212ENST00000509333 TTC39AQ5SRH9 613 aa19.81■□□□□ 0.76
PDLIM5-212ENST00000509333 TLR7Q9NYK1 1049 aaKnown RBP19.81■□□□□ 0.76
PDLIM5-212ENST00000509333 GAKO14976 1311 aa19.8■□□□□ 0.76
PDLIM5-212ENST00000509333 RAB11FIP3O75154 756 aa19.8■□□□□ 0.76
PDLIM5-212ENST00000509333 SLF2Q8IX21 1173 aa19.8■□□□□ 0.76
PDLIM5-212ENST00000509333 NSUN4Q96CB9 384 aaKnown RBP19.8■□□□□ 0.76
PDLIM5-212ENST00000509333 SLC10A4Q96EP9 437 aa19.8■□□□□ 0.76
PDLIM5-212ENST00000509333 IL1RAPL2Q9NP60 686 aa19.8■□□□□ 0.76
PDLIM5-212ENST00000509333 TMOD2Q9NZR1 351 aa19.8■□□□□ 0.76
PDLIM5-212ENST00000509333 GPR75-ASB3A0A0A6YYF3 556 aa19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 CYP2E1P05181 493 aaPredicted RBP19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 RRP1P56182 461 aaKnown RBP19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 NFIAQ12857 509 aa19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 AACSQ86V21 672 aa19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 DZIP1Q86YF9 867 aaKnown RBP19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 FAM151AQ8WW52 585 aa19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 KIF1BPQ96EK5 621 aa19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 BEGAINQ9BUH8 593 aa19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 PRDM10Q9NQV6 1147 aa19.79■□□□□ 0.76
PDLIM5-212ENST00000509333 PAPPA2Q9BXP8 1791 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 LDHCP07864 332 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 HSPA8P11142 646 aaKnown RBP19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 LBX1P52954 281 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 ZFPM1Q8IX07 1006 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 REM2Q8IYK8 340 aaPredicted RBP19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 CLMNQ96JQ2 1002 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 LRP2BPQ9P2M1 347 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 FAM198AQ9UFP1 575 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 SSC5DA1L4H1 1573 aa19.78■□□□□ 0.76
PDLIM5-212ENST00000509333 ARAP2Q8WZ64 1704 aa19.77■□□□□ 0.76
PDLIM5-212ENST00000509333 ECM29Q5VYK3 1845 aa19.77■□□□□ 0.76
PDLIM5-212ENST00000509333 ZAP70P43403 619 aa19.77■□□□□ 0.76
PDLIM5-212ENST00000509333 IREB2P48200 963 aaKnown RBP19.77■□□□□ 0.76
PDLIM5-212ENST00000509333 TM4SF4P48230 202 aa19.77■□□□□ 0.76
PDLIM5-212ENST00000509333 IDI2Q9BXS1 227 aa19.77■□□□□ 0.76
PDLIM5-212ENST00000509333 RAI14Q9P0K7 980 aa19.77■□□□□ 0.76
PDLIM5-212ENST00000509333 APBB1O00213 710 aa19.76■□□□□ 0.75
PDLIM5-212ENST00000509333 MAP3K9P80192 1104 aa19.76■□□□□ 0.75
PDLIM5-212ENST00000509333 TCP10Q12799 353 aa19.76■□□□□ 0.75
PDLIM5-212ENST00000509333 SPRYD7Q5W111 196 aa19.76■□□□□ 0.75
PDLIM5-212ENST00000509333 CLASRPQ8N2M8 674 aaKnown RBP19.76■□□□□ 0.75
PDLIM5-212ENST00000509333 PCDHB15Q9Y5E8 787 aa19.76■□□□□ 0.75
PDLIM5-212ENST00000509333 MYH13Q9UKX3 1938 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 CA12O43570 354 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 RHBDL3P58872 404 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 GSTO1P78417 241 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 ANKRD13AQ8IZ07 590 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 DCTPP1Q9H773 170 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 RNF186Q9NXI6 227 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 MROH7-TTC4A0A0A0MT08 1334 aa19.75■□□□□ 0.75
PDLIM5-212ENST00000509333 IGSF3O75054 1194 aa19.74■□□□□ 0.75
PDLIM5-212ENST00000509333 ENTPD3O75355 529 aa19.74■□□□□ 0.75
PDLIM5-212ENST00000509333 WDHD1O75717 1129 aaPredicted RBP19.74■□□□□ 0.75
PDLIM5-212ENST00000509333 BTDP43251 543 aa19.74■□□□□ 0.75
PDLIM5-212ENST00000509333 PIH1D3Q9NQM4 214 aaKnown RBP19.74■□□□□ 0.75
PDLIM5-212ENST00000509333 TSKSQ9UJT2 592 aa19.74■□□□□ 0.75
PDLIM5-212ENST00000509333 RGS3P49796 1198 aa19.73■□□□□ 0.75
PDLIM5-212ENST00000509333 PPP4CP60510 307 aa19.73■□□□□ 0.75
PDLIM5-212ENST00000509333 MKRN3Q13064 507 aaKnown RBP19.73■□□□□ 0.75
PDLIM5-212ENST00000509333 MIGA2Q7L4E1 593 aa19.73■□□□□ 0.75
PDLIM5-212ENST00000509333 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.73■□□□□ 0.751e-6■■■□□ 17.2
PDLIM5-212ENST00000509333 AKAP11Q9UKA4 1901 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 TRPA1O75762 1119 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 MAP4K4O95819 1239 aaPredicted RBP19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 SH3BP5LQ7L8J4 393 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 HOOK2Q96ED9 719 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 WNK4Q96J92 1243 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 ANTXR1Q9H6X2 564 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 DDX4Q9NQI0 724 aaKnown RBP19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 NDUFB9Q9Y6M9 179 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 MYH2Q9UKX2 1941 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 THSD7BQ9C0I4 1608 aa19.72■□□□□ 0.75
PDLIM5-212ENST00000509333 IFIT2P09913 472 aaKnown RBP19.71■□□□□ 0.75
PDLIM5-212ENST00000509333 GJA5P36382 358 aa19.71■□□□□ 0.75
PDLIM5-212ENST00000509333 MAP3K10Q02779 954 aa19.71■□□□□ 0.75
PDLIM5-212ENST00000509333 NAA16Q6N069 864 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-212ENST00000509333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
PDLIM5-212ENST00000509333 CRBNQ96SW2 442 aa19.71■□□□□ 0.75
PDLIM5-212ENST00000509333 ZNF112Q9UJU3 913 aa19.71■□□□□ 0.75
PDLIM5-212ENST00000509333 SMARCA5O60264 1052 aaPredicted RBP19.7■□□□□ 0.74
PDLIM5-212ENST00000509333 ZBTB48P10074 688 aaPredicted RBP19.7■□□□□ 0.74
PDLIM5-212ENST00000509333 INHBEP58166 350 aa19.7■□□□□ 0.74
PDLIM5-212ENST00000509333 DCAF15Q66K64 600 aa19.7■□□□□ 0.74
PDLIM5-212ENST00000509333 ELP3Q9H9T3 547 aa19.7■□□□□ 0.74
PDLIM5-212ENST00000509333 SAGE1Q9NXZ1 904 aa19.7■□□□□ 0.74
PDLIM5-212ENST00000509333 DDTLA6NHG4 134 aaPredicted RBP19.69■□□□□ 0.74
PDLIM5-212ENST00000509333 VGLL4Q14135 290 aa19.69■□□□□ 0.74
PDLIM5-212ENST00000509333 ADGRA1Q86SQ6 560 aa19.69■□□□□ 0.74
PDLIM5-212ENST00000509333 ZKSCAN4Q969J2 545 aaPredicted RBP19.69■□□□□ 0.74
PDLIM5-212ENST00000509333 ZNF341Q9BYN7 854 aa19.69■□□□□ 0.74
PDLIM5-212ENST00000509333 LRRCC1Q9C099 1032 aa19.69■□□□□ 0.74
PDLIM5-212ENST00000509333 BCL11AQ9H165 835 aa19.69■□□□□ 0.74
PDLIM5-212ENST00000509333 RPAP1Q9BWH6 1393 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms