RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 PRDX5P30044 214 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 TIMM10P62072 90 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 MAP3K9P80192 1104 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 TFCP2Q12800 502 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 MTX1Q13505 466 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 CCL15Q16663 113 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 BRI3BPQ8WY22 251 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 ZDHHC15Q96MV8 337 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 CEP126Q9P2H0 1117 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 SUGT1Q9Y2Z0 365 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 CENPFP49454 3210 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 WDHD1O75717 1129 aaPredicted RBP13.56□□□□□ -0.24
RNF4-212ENST00000509258 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
RNF4-212ENST00000509258 ARHGEF6Q15052 776 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 TAF1CQ15572 869 aaPredicted RBP13.56□□□□□ -0.24
RNF4-212ENST00000509258 FKBP1CQ5VVH2 108 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 ZFYVE28Q9HCC9 887 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 BRCA2P51587 3418 aa13.56□□□□□ -0.24
RNF4-212ENST00000509258 RPAP1Q9BWH6 1393 aaPredicted RBP13.56□□□□□ -0.24
RNF4-212ENST00000509258 MKI67P46013 3256 aaKnown RBP13.56□□□□□ -0.24
RNF4-212ENST00000509258 RBBP6Q7Z6E9 1792 aaKnown RBP13.55□□□□□ -0.24
RNF4-212ENST00000509258 KIAA0100Q14667 2235 aaKnown RBP13.55□□□□□ -0.24
RNF4-212ENST00000509258 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
RNF4-212ENST00000509258 GNAI3P08754 354 aa13.55□□□□□ -0.24
RNF4-212ENST00000509258 CCDC102BQ68D86 513 aa13.55□□□□□ -0.24
RNF4-212ENST00000509258 FAM83AQ86UY5 434 aa13.55□□□□□ -0.24
RNF4-212ENST00000509258 WRNIP1Q96S55 665 aa13.55□□□□□ -0.24
RNF4-212ENST00000509258 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
RNF4-212ENST00000509258 DAGLAQ9Y4D2 1042 aa13.55□□□□□ -0.24
RNF4-212ENST00000509258 PTPRFP10586 1907 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 A0A1B0GUL7 405 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 NFIAQ12857 509 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 RASGRF1Q13972 1273 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 PI16Q6UXB8 463 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 ZNF384Q8TF68 577 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 ZCCHC17Q9NP64 241 aaKnown RBP13.54□□□□□ -0.24
RNF4-212ENST00000509258 SNCAIPQ9Y6H5 919 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 PHIPQ8WWQ0 1821 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
RNF4-212ENST00000509258 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
RNF4-212ENST00000509258 GNAI2P04899 355 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 CETPP11597 493 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 CAP1Q01518 475 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 CDC42EP5Q6NZY7 148 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 HHIPL2Q6UWX4 724 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 ZFPM1Q8IX07 1006 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 FAM43AQ8N2R8 423 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 WDR66Q8TBY9 1149 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 ZNF333Q96JL9 665 aa13.53□□□□□ -0.24
RNF4-212ENST00000509258 TLR2O60603 784 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 SLURP2P0DP57 97 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 PPIL2Q13356 520 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 POLA2Q14181 598 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 NBPF11Q86T75 865 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 FAM198AQ9UFP1 575 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 SALL1Q9NSC2 1324 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 RFX7Q2KHR2 1363 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 MAST2Q6P0Q8 1798 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 FOCADQ5VW36 1801 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 ATAD5Q96QE3 1844 aa13.52□□□□□ -0.25
RNF4-212ENST00000509258 IRF6O14896 467 aa13.51□□□□□ -0.25
RNF4-212ENST00000509258 ZKSCAN4Q969J2 545 aaPredicted RBP13.51□□□□□ -0.25
RNF4-212ENST00000509258 ZNF341Q9BYN7 854 aa13.51□□□□□ -0.25
RNF4-212ENST00000509258 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
RNF4-212ENST00000509258 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
RNF4-212ENST00000509258 PTCH2Q9Y6C5 1203 aa13.51□□□□□ -0.25
RNF4-212ENST00000509258 GAKO14976 1311 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 BTBD19C9JJ37 291 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 ZBTB7BO15156 539 aaPredicted RBP13.5□□□□□ -0.25
RNF4-212ENST00000509258 ZBTB22O15209 634 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 GNRH1P01148 92 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
RNF4-212ENST00000509258 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
RNF4-212ENST00000509258 PPATQ06203 517 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 TCP10Q12799 353 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 KIF22Q14807 665 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 MIGA2Q7L4E1 593 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 DOCK1Q14185 1865 aa13.5□□□□□ -0.25
RNF4-212ENST00000509258 ATRNL1Q5VV63 1379 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 SEMA3EO15041 775 aa13.49□□□□□ -0.25
RNF4-212ENST00000509258 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms