RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 CNKSR1Q969H4 720 aa9.78□□□□□ -0.84
CCSER1-208ENST00000509109 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
CCSER1-208ENST00000509109 FER1L6Q2WGJ9 1857 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 CCDC88AQ3V6T2 1871 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 CAMTA2O94983 1202 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 A1BGP04217 495 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 LMNB1P20700 586 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 USP4Q13107 963 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 SOGA3Q5TF21 947 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 PRR5LQ6MZQ0 368 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 GRIP2Q9C0E4 1043 aa9.77□□□□□ -0.85
CCSER1-208ENST00000509109 DICER1Q9UPY3 1922 aaKnown RBP9.77□□□□□ -0.85
CCSER1-208ENST00000509109 PIK3CDO00329 1044 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 KCNQ3O43525 872 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 RAD21O60216 631 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 LMOD3Q0VAK6 560 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 DCTN1Q14203 1278 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 NFE2L2Q16236 605 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 RNFT1Q5M7Z0 435 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 NBPF5PQ86XG9 351 aaPredicted RBP9.76□□□□□ -0.85
CCSER1-208ENST00000509109 PLPP7Q8NBV4 271 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 ZNF622Q969S3 477 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCSER1-208ENST00000509109 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 USP16Q9Y5T5 823 aa9.76□□□□□ -0.85
CCSER1-208ENST00000509109 CENPCQ03188 943 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 FLIIQ13045 1269 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 TMEM132AQ24JP5 1023 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 STYK1Q6J9G0 422 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 RIPOR1Q6ZS17 1223 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 GAS2L1Q99501 681 aaPredicted RBP9.75□□□□□ -0.85
CCSER1-208ENST00000509109 NMRK2Q9NPI5 230 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 WDR90Q96KV7 1748 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 PCNTO95613 3336 aa9.75□□□□□ -0.85
CCSER1-208ENST00000509109 SOX11P35716 441 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 RASSF7Q02833 373 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 NBPF10Q6P3W6 841 aaKnown RBP9.74□□□□□ -0.85
CCSER1-208ENST00000509109 TPTE2Q6XPS3 522 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 KIF6Q6ZMV9 814 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 WWC1Q8IX03 1113 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 MASTLQ96GX5 879 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 PLEKHF1Q96S99 279 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCSER1-208ENST00000509109 NUP98P52948 1817 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 MYBBP1AQ9BQG0 1328 aaKnown RBP9.74□□□□□ -0.85
CCSER1-208ENST00000509109 LTBP3Q9NS15 1303 aa9.74□□□□□ -0.85
CCSER1-208ENST00000509109 PRAMEF22A3QJZ6 481 aa9.73□□□□□ -0.85
CCSER1-208ENST00000509109 SRGNP10124 158 aa9.73□□□□□ -0.85
CCSER1-208ENST00000509109 PHKA2P46019 1235 aa9.73□□□□□ -0.85
CCSER1-208ENST00000509109 PIP4K2AP48426 406 aaPredicted RBP9.73□□□□□ -0.85
CCSER1-208ENST00000509109 FSTL1Q12841 308 aa9.73□□□□□ -0.85
CCSER1-208ENST00000509109 PRPF40BQ6NWY9 871 aaKnown RBP9.73□□□□□ -0.85
CCSER1-208ENST00000509109 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
CCSER1-208ENST00000509109 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
CCSER1-208ENST00000509109 ETNK1Q9HBU6 452 aa9.73□□□□□ -0.85
CCSER1-208ENST00000509109 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
CCSER1-208ENST00000509109 SLX4Q8IY92 1834 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 FAM181BA6NEQ2 426 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 POM121CA8CG34 1229 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 NFKBIEO00221 500 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 C21orf2O43822 256 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 NPR1P16066 1061 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
CCSER1-208ENST00000509109 WDR43Q15061 677 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCSER1-208ENST00000509109 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 XAGE2Q96GT9 111 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 ZSCAN10Q96SZ4 725 aaPredicted RBP9.72□□□□□ -0.85
CCSER1-208ENST00000509109 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 BABAM1Q9NWV8 329 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 TSPYL4Q9UJ04 414 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 ANKRD36CQ5JPF3 1778 aa9.72□□□□□ -0.85
CCSER1-208ENST00000509109 GLTPD2A6NH11 291 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 GPR25O00155 361 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 SKIP12755 728 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 VEGFAP15692 232 aaPredicted RBP9.71□□□□□ -0.86
CCSER1-208ENST00000509109 EIF4A1P60842 406 aaKnown RBP9.71□□□□□ -0.86
CCSER1-208ENST00000509109 MAP7D1Q3KQU3 841 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 CCDC93Q567U6 631 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 SMC1BQ8NDV3 1235 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 ALG2Q9H553 416 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 MIS18AQ9NYP9 233 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 DYRK1BQ9Y463 629 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 MAP3K15Q6ZN16 1313 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 RIC1Q4ADV7 1423 aa9.71□□□□□ -0.86
CCSER1-208ENST00000509109 RIPK4P57078 832 aa9.7□□□□□ -0.86
CCSER1-208ENST00000509109 DBN1Q16643 649 aa9.7□□□□□ -0.86
CCSER1-208ENST00000509109 TMEM214Q6NUQ4 689 aaKnown RBP9.7□□□□□ -0.86
CCSER1-208ENST00000509109 ZNF837Q96EG3 531 aaPredicted RBP9.7□□□□□ -0.86
CCSER1-208ENST00000509109 THUMPD2Q9BTF0 503 aaKnown RBP9.7□□□□□ -0.86
CCSER1-208ENST00000509109 RRAGCQ9HB90 399 aa9.7□□□□□ -0.86
CCSER1-208ENST00000509109 MYL6BP14649 208 aa9.69□□□□□ -0.86
CCSER1-208ENST00000509109 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
CCSER1-208ENST00000509109 SCN4AP35499 1836 aa9.69□□□□□ -0.86
CCSER1-208ENST00000509109 DDX10Q13206 875 aaKnown RBP9.69□□□□□ -0.86
CCSER1-208ENST00000509109 TRIM22Q8IYM9 498 aa9.69□□□□□ -0.86
CCSER1-208ENST00000509109 CLUAP1Q96AJ1 413 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms