RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CAPN15O75808 1086 aa22.94■■□□□ 1.26
UBE3D-207ENST00000509102 INHBEP58166 350 aa22.94■■□□□ 1.26
UBE3D-207ENST00000509102 CCDC158Q5M9N0 1113 aa22.94■■□□□ 1.26
UBE3D-207ENST00000509102 ERICH6Q7L0X2 663 aa22.94■■□□□ 1.26
UBE3D-207ENST00000509102 MANSC4A6NHS7 340 aaPredicted RBP22.93■■□□□ 1.26
UBE3D-207ENST00000509102 TM4SF4P48230 202 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 TNNI3KQ59H18 835 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 DCAF15Q66K64 600 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 CEP85Q6P2H3 762 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 SPATA5Q8NB90 893 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 CLMNQ96JQ2 1002 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 NOP58Q9Y2X3 529 aaKnown RBP22.93■■□□□ 1.26
UBE3D-207ENST00000509102 CSADQ9Y600 493 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 FPGT-TNNI3KV9GXZ4 949 aa22.93■■□□□ 1.26
UBE3D-207ENST00000509102 RPAP1Q9BWH6 1393 aaPredicted RBP22.92■■□□□ 1.26
UBE3D-207ENST00000509102 ARID4AP29374 1257 aaPredicted RBP22.92■■□□□ 1.26
UBE3D-207ENST00000509102 TTC39AQ5SRH9 613 aa22.92■■□□□ 1.26
UBE3D-207ENST00000509102 CDC42EP5Q6NZY7 148 aa22.92■■□□□ 1.26
UBE3D-207ENST00000509102 ERC1Q8IUD2 1116 aa22.92■■□□□ 1.26
UBE3D-207ENST00000509102 WNK4Q96J92 1243 aa22.92■■□□□ 1.26
UBE3D-207ENST00000509102 USP40Q9NVE5 1235 aa22.92■■□□□ 1.26
UBE3D-207ENST00000509102 ALDH1A1P00352 501 aa22.91■■□□□ 1.26
UBE3D-207ENST00000509102 GSTO1P78417 241 aa22.91■■□□□ 1.26
UBE3D-207ENST00000509102 HSP90AB4PQ58FF6 505 aa22.91■■□□□ 1.26
UBE3D-207ENST00000509102 FAM151AQ8WW52 585 aa22.91■■□□□ 1.26
UBE3D-207ENST00000509102 HMG20BQ9P0W2 317 aa22.91■■□□□ 1.26
UBE3D-207ENST00000509102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.91■■□□□ 1.26
UBE3D-207ENST00000509102 HMMRO75330 724 aa22.9■■□□□ 1.26
UBE3D-207ENST00000509102 MAP3K9P80192 1104 aa22.9■■□□□ 1.26
UBE3D-207ENST00000509102 COG6Q9Y2V7 657 aa22.9■■□□□ 1.26
UBE3D-207ENST00000509102 LDHCP07864 332 aa22.89■■□□□ 1.25
UBE3D-207ENST00000509102 OTUD7BQ6GQQ9 843 aa22.89■■□□□ 1.25
UBE3D-207ENST00000509102 CDAN1Q8IWY9 1227 aa22.89■■□□□ 1.25
UBE3D-207ENST00000509102 ELP3Q9H9T3 547 aa22.89■■□□□ 1.25
UBE3D-207ENST00000509102 RAI14Q9P0K7 980 aa22.89■■□□□ 1.25
UBE3D-207ENST00000509102 GAKO14976 1311 aa22.88■■□□□ 1.25
UBE3D-207ENST00000509102 TCP10Q12799 353 aa22.88■■□□□ 1.25
UBE3D-207ENST00000509102 RPAP2Q8IXW5 612 aaPredicted RBP22.88■■□□□ 1.25
UBE3D-207ENST00000509102 FAM163AQ96GL9 167 aaPredicted RBP22.88■■□□□ 1.25
UBE3D-207ENST00000509102 LRP2BPQ9P2M1 347 aa22.88■■□□□ 1.25
UBE3D-207ENST00000509102 MROH7-TTC4A0A0A0MT08 1334 aa22.87■■□□□ 1.25
UBE3D-207ENST00000509102 MECOMQ03112 1051 aa22.87■■□□□ 1.25
UBE3D-207ENST00000509102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.87■■□□□ 1.25
UBE3D-207ENST00000509102 OPTNQ96CV9 577 aa22.87■■□□□ 1.25
UBE3D-207ENST00000509102 WRNIP1Q96S55 665 aa22.87■■□□□ 1.25
UBE3D-207ENST00000509102 DBNDD2Q9BQY9 259 aa22.87■■□□□ 1.25
UBE3D-207ENST00000509102 NOL10Q9BSC4 688 aaKnown RBP22.87■■□□□ 1.25
UBE3D-207ENST00000509102 ZNF341Q9BYN7 854 aa22.87■■□□□ 1.25
UBE3D-207ENST00000509102 MCAMP43121 646 aa22.86■■□□□ 1.25
UBE3D-207ENST00000509102 BTDP43251 543 aa22.86■■□□□ 1.25
UBE3D-207ENST00000509102 DGKZQ13574 1117 aa22.86■■□□□ 1.25
UBE3D-207ENST00000509102 VGLL4Q14135 290 aa22.86■■□□□ 1.25
UBE3D-207ENST00000509102 PI16Q6UXB8 463 aa22.86■■□□□ 1.25
UBE3D-207ENST00000509102 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.86■■□□□ 1.25
UBE3D-207ENST00000509102 CASP8AP2Q9UKL3 1982 aa22.86■■□□□ 1.25
UBE3D-207ENST00000509102 MYH2Q9UKX2 1941 aa22.86■■□□□ 1.25
UBE3D-207ENST00000509102 ENTPD3O75355 529 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 TBC1D8O95759 1140 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 NFIAQ12857 509 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 PDE3AQ14432 1141 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 IFNL1Q8IU54 200 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 ABHD8Q96I13 439 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 IDI2Q9BXS1 227 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 EXOC6BQ9Y2D4 811 aa22.85■■□□□ 1.25
UBE3D-207ENST00000509102 MAP4K4O95819 1239 aaPredicted RBP22.84■■□□□ 1.25
UBE3D-207ENST00000509102 TBC1D9Q6ZT07 1266 aa22.84■■□□□ 1.25
UBE3D-207ENST00000509102 ZSCAN29Q8IWY8 852 aaPredicted RBP22.84■■□□□ 1.25
UBE3D-207ENST00000509102 ZNF512BQ96KM6 892 aaPredicted RBP22.84■■□□□ 1.25
UBE3D-207ENST00000509102 ZBTB40Q9NUA8 1239 aa22.84■■□□□ 1.25
UBE3D-207ENST00000509102 IGSF3O75054 1194 aa22.83■■□□□ 1.25
UBE3D-207ENST00000509102 RGS3P49796 1198 aa22.83■■□□□ 1.25
UBE3D-207ENST00000509102 GTF2A2P52657 109 aa22.83■■□□□ 1.25
UBE3D-207ENST00000509102 MIGA2Q7L4E1 593 aa22.83■■□□□ 1.25
UBE3D-207ENST00000509102 NSUN4Q96CB9 384 aaKnown RBP22.83■■□□□ 1.25
UBE3D-207ENST00000509102 MCOLN1Q9GZU1 580 aa22.83■■□□□ 1.25
UBE3D-207ENST00000509102 FAM198AQ9UFP1 575 aa22.83■■□□□ 1.25
UBE3D-207ENST00000509102 OTOFQ9HC10 1997 aa22.83■■□□□ 1.24
UBE3D-207ENST00000509102 GPR75-ASB3A0A0A6YYF3 556 aa22.82■■□□□ 1.24
UBE3D-207ENST00000509102 NOM1Q5C9Z4 860 aaKnown RBP22.82■■□□□ 1.24
UBE3D-207ENST00000509102 ERO1BQ86YB8 467 aa22.82■■□□□ 1.24
UBE3D-207ENST00000509102 OTUD5Q96G74 571 aa22.82■■□□□ 1.24
UBE3D-207ENST00000509102 CFHR5Q9BXR6 569 aa22.82■■□□□ 1.24
UBE3D-207ENST00000509102 CCDC8Q9H0W5 538 aaPredicted RBP22.82■■□□□ 1.24
UBE3D-207ENST00000509102 SNRKQ9NRH2 765 aa22.82■■□□□ 1.24
UBE3D-207ENST00000509102 DBNLQ9UJU6 430 aaKnown RBP22.82■■□□□ 1.24
UBE3D-207ENST00000509102 AK9Q5TCS8 1911 aa22.82■■□□□ 1.24
UBE3D-207ENST00000509102 SPDYE5A6NIY4 337 aa22.81■■□□□ 1.24
UBE3D-207ENST00000509102 WDHD1O75717 1129 aaPredicted RBP22.81■■□□□ 1.24
UBE3D-207ENST00000509102 BAG3O95817 575 aa22.81■■□□□ 1.24
UBE3D-207ENST00000509102 PICALMQ13492 652 aa22.81■■□□□ 1.24
UBE3D-207ENST00000509102 NAA16Q6N069 864 aaPredicted RBP22.81■■□□□ 1.24
UBE3D-207ENST00000509102 AACSQ86V21 672 aa22.81■■□□□ 1.24
UBE3D-207ENST00000509102 EAF2Q96CJ1 260 aaPredicted RBP22.81■■□□□ 1.24
UBE3D-207ENST00000509102 GPR25O00155 361 aa22.8■■□□□ 1.24
UBE3D-207ENST00000509102 GJA5P36382 358 aa22.8■■□□□ 1.24
UBE3D-207ENST00000509102 CTU1Q7Z7A3 348 aaKnown RBP22.8■■□□□ 1.24
UBE3D-207ENST00000509102 CLASRPQ8N2M8 674 aaKnown RBP22.8■■□□□ 1.24
UBE3D-207ENST00000509102 ZKSCAN4Q969J2 545 aaPredicted RBP22.8■■□□□ 1.24
UBE3D-207ENST00000509102 KIF1BPQ96EK5 621 aa22.8■■□□□ 1.24
UBE3D-207ENST00000509102 PLCG2P16885 1265 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms