RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CTGFP29279 349 aa20.11■□□□□ 0.81
CXCL1-202ENST00000509101 INPP5BP32019 993 aa20.11■□□□□ 0.81
CXCL1-202ENST00000509101 FKBP1CQ5VVH2 108 aa20.11■□□□□ 0.81
CXCL1-202ENST00000509101 MIGA2Q7L4E1 593 aa20.11■□□□□ 0.81
CXCL1-202ENST00000509101 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
CXCL1-202ENST00000509101 ZNF341Q9BYN7 854 aa20.11■□□□□ 0.81
CXCL1-202ENST00000509101 CPA4Q9UI42 421 aa20.11■□□□□ 0.81
CXCL1-202ENST00000509101 SZT2Q5T011 3432 aa20.11■□□□□ 0.81
CXCL1-202ENST00000509101 PRMT2P55345 433 aa20.1■□□□□ 0.81
CXCL1-202ENST00000509101 PPATQ06203 517 aa20.1■□□□□ 0.81
CXCL1-202ENST00000509101 MTFR1Q15390 333 aa20.1■□□□□ 0.81
CXCL1-202ENST00000509101 C17orf99Q6UX52 265 aa20.1■□□□□ 0.81
CXCL1-202ENST00000509101 SHISA4Q96DD7 197 aa20.1■□□□□ 0.81
CXCL1-202ENST00000509101 TRIM47Q96LD4 638 aa20.09■□□□□ 0.81
CXCL1-202ENST00000509101 MRIQ9BWK5 157 aa20.09■□□□□ 0.81
CXCL1-202ENST00000509101 SUGT1Q9Y2Z0 365 aa20.09■□□□□ 0.81
CXCL1-202ENST00000509101 ADGRA2Q96PE1 1338 aa20.08■□□□□ 0.81
CXCL1-202ENST00000509101 PDHXO00330 501 aa20.08■□□□□ 0.81
CXCL1-202ENST00000509101 IFIT1P09914 478 aaKnown RBP20.08■□□□□ 0.81
CXCL1-202ENST00000509101 PSMC4P43686 418 aa20.08■□□□□ 0.81
CXCL1-202ENST00000509101 PUM3Q15397 648 aaKnown RBP20.08■□□□□ 0.81
CXCL1-202ENST00000509101 HHIPL2Q6UWX4 724 aa20.08■□□□□ 0.81
CXCL1-202ENST00000509101 ANKRD23Q86SG2 305 aa20.08■□□□□ 0.81
CXCL1-202ENST00000509101 SRRDQ9UH36 339 aa20.08■□□□□ 0.81
CXCL1-202ENST00000509101 PTPRFP10586 1907 aa20.08■□□□□ 0.8
CXCL1-202ENST00000509101 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 FGFR2P21802 821 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 OSBPP22059 807 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 TCP10Q12799 353 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 CHRDL2Q6WN34 429 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 RAET1EQ8TD07 263 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 FAM151AQ8WW52 585 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 MYH2Q9UKX2 1941 aa20.07■□□□□ 0.8
CXCL1-202ENST00000509101 RANBP2P49792 3224 aaKnown RBP20.07■□□□□ 0.8
CXCL1-202ENST00000509101 MYPNQ86TC9 1320 aa20.06■□□□□ 0.8
CXCL1-202ENST00000509101 FMNL1O95466 1100 aaPredicted RBP20.06■□□□□ 0.8
CXCL1-202ENST00000509101 KCNH4Q9UQ05 1017 aa20.06■□□□□ 0.8
CXCL1-202ENST00000509101 DAGLAQ9Y4D2 1042 aa20.06■□□□□ 0.8
CXCL1-202ENST00000509101 DOCK1Q14185 1865 aa20.05■□□□□ 0.8
CXCL1-202ENST00000509101 GRK4P32298 578 aa20.05■□□□□ 0.8
CXCL1-202ENST00000509101 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
CXCL1-202ENST00000509101 DIXDC1Q155Q3 683 aa20.05■□□□□ 0.8
CXCL1-202ENST00000509101 DPF3Q92784 378 aa20.05■□□□□ 0.8
CXCL1-202ENST00000509101 SLC5A1P13866 664 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 HOXD10P28358 340 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 NFIAQ12857 509 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 MOGSQ13724 837 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 CDC42EP5Q6NZY7 148 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 WDR66Q8TBY9 1149 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 ZNF112Q9UJU3 913 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 PHIPQ8WWQ0 1821 aa20.04■□□□□ 0.8
CXCL1-202ENST00000509101 CCL5P13501 91 aa20.03■□□□□ 0.8
CXCL1-202ENST00000509101 PRDX5P30044 214 aa20.03■□□□□ 0.8
CXCL1-202ENST00000509101 NOL9Q5SY16 702 aaKnown RBP20.03■□□□□ 0.8
CXCL1-202ENST00000509101 MRPL50Q8N5N7 158 aaKnown RBP20.03■□□□□ 0.8
CXCL1-202ENST00000509101 ANP32CO43423 234 aa20.02■□□□□ 0.8
CXCL1-202ENST00000509101 PRKCZQ05513 592 aa20.02■□□□□ 0.8
CXCL1-202ENST00000509101 NKX2-3Q8TAU0 364 aa20.02■□□□□ 0.8
CXCL1-202ENST00000509101 LPIN2Q92539 896 aa20.02■□□□□ 0.8
CXCL1-202ENST00000509101 PARK7Q99497 189 aaKnown RBP20.02■□□□□ 0.8
CXCL1-202ENST00000509101 BIN2Q9UBW5 565 aaPredicted RBP20.02■□□□□ 0.8
CXCL1-202ENST00000509101 FAM198AQ9UFP1 575 aa20.02■□□□□ 0.8
CXCL1-202ENST00000509101 EYA2O00167 538 aa20.01■□□□□ 0.79
CXCL1-202ENST00000509101 CYP2C8P10632 490 aa20.01■□□□□ 0.79
CXCL1-202ENST00000509101 GJA8P48165 433 aa20.01■□□□□ 0.79
CXCL1-202ENST00000509101 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
CXCL1-202ENST00000509101 USP44Q9H0E7 712 aa20.01■□□□□ 0.79
CXCL1-202ENST00000509101 RNF208Q9H0X6 261 aa20.01■□□□□ 0.79
CXCL1-202ENST00000509101 RBM27Q9P2N5 1060 aaKnown RBP20.01■□□□□ 0.79
CXCL1-202ENST00000509101 PTPRCP08575 1304 aa20.01■□□□□ 0.79
CXCL1-202ENST00000509101 GJB1P08034 283 aa20■□□□□ 0.79
CXCL1-202ENST00000509101 BCRP11274 1271 aa20■□□□□ 0.79
CXCL1-202ENST00000509101 RFX5P48382 616 aaPredicted RBP20■□□□□ 0.79
CXCL1-202ENST00000509101 FCGRTP55899 365 aa20■□□□□ 0.79
CXCL1-202ENST00000509101 UBXN2AP68543 259 aa20■□□□□ 0.79
CXCL1-202ENST00000509101 ATRNL1Q5VV63 1379 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 LDHBP07195 334 aaKnown RBP19.99■□□□□ 0.79
CXCL1-202ENST00000509101 GPAT2Q6NUI2 795 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 UBE2Q1Q7Z7E8 422 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 ZFPM1Q8IX07 1006 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 HTATIP2Q9BUP3 242 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 USP40Q9NVE5 1235 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 GABRQQ9UN88 632 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 ALPK3Q96L96 1907 aa19.99■□□□□ 0.79
CXCL1-202ENST00000509101 ATG9AQ7Z3C6 839 aa19.98■□□□□ 0.79
CXCL1-202ENST00000509101 SLAIN1Q8ND83 568 aa19.98■□□□□ 0.79
CXCL1-202ENST00000509101 SIL1Q9H173 461 aa19.98■□□□□ 0.79
CXCL1-202ENST00000509101 ATAD5Q96QE3 1844 aa19.97■□□□□ 0.79
CXCL1-202ENST00000509101 DOCK3Q8IZD9 2030 aa19.97■□□□□ 0.79
CXCL1-202ENST00000509101 CXCL11O14625 94 aa19.97■□□□□ 0.79
CXCL1-202ENST00000509101 FARP2O94887 1054 aaPredicted RBP19.97■□□□□ 0.79
CXCL1-202ENST00000509101 ATP2B3Q16720 1220 aa19.97■□□□□ 0.79
CXCL1-202ENST00000509101 GADL1Q6ZQY3 521 aa19.97■□□□□ 0.79
CXCL1-202ENST00000509101 U2AF1L4Q8WU68 220 aaKnown RBP19.97■□□□□ 0.79
CXCL1-202ENST00000509101 UNC93B1Q9H1C4 597 aa19.97■□□□□ 0.79
CXCL1-202ENST00000509101 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
CXCL1-202ENST00000509101 RFX7Q2KHR2 1363 aa19.96■□□□□ 0.79
CXCL1-202ENST00000509101 A0A0G2JLL6 359 aaPredicted RBP19.96■□□□□ 0.79
CXCL1-202ENST00000509101 RGS3P49796 1198 aa19.96■□□□□ 0.79
CXCL1-202ENST00000509101 PRRT2Q7Z6L0 340 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms