RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ATP8B2P98198 1209 aa18.28■□□□□ 0.52
UBE2D3-228ENST00000508974 SREBF2Q12772 1141 aa18.28■□□□□ 0.52
UBE2D3-228ENST00000508974 POLA2Q14181 598 aa18.28■□□□□ 0.52
UBE2D3-228ENST00000508974 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
UBE2D3-228ENST00000508974 ANKRD13AQ8IZ07 590 aa18.28■□□□□ 0.52
UBE2D3-228ENST00000508974 ABHD8Q96I13 439 aa18.28■□□□□ 0.52
UBE2D3-228ENST00000508974 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
UBE2D3-228ENST00000508974 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
UBE2D3-228ENST00000508974 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.52
UBE2D3-228ENST00000508974 TCP10Q12799 353 aa18.27■□□□□ 0.52
UBE2D3-228ENST00000508974 DGKZQ13574 1117 aa18.27■□□□□ 0.52
UBE2D3-228ENST00000508974 CDC42EP5Q6NZY7 148 aa18.27■□□□□ 0.52
UBE2D3-228ENST00000508974 DZIP1Q86YF9 867 aaKnown RBP18.27■□□□□ 0.52
UBE2D3-228ENST00000508974 SSH3Q8TE77 659 aa18.27■□□□□ 0.52
UBE2D3-228ENST00000508974 GJA5P36382 358 aa18.26■□□□□ 0.51
UBE2D3-228ENST00000508974 TM4SF4P48230 202 aa18.26■□□□□ 0.51
UBE2D3-228ENST00000508974 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
UBE2D3-228ENST00000508974 MCOLN1Q9GZU1 580 aa18.26■□□□□ 0.51
UBE2D3-228ENST00000508974 USP40Q9NVE5 1235 aa18.26■□□□□ 0.51
UBE2D3-228ENST00000508974 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
UBE2D3-228ENST00000508974 NFIAQ12857 509 aa18.25■□□□□ 0.51
UBE2D3-228ENST00000508974 VGLL4Q14135 290 aa18.25■□□□□ 0.51
UBE2D3-228ENST00000508974 TBC1D9Q6ZT07 1266 aa18.25■□□□□ 0.51
UBE2D3-228ENST00000508974 FAM83AQ86UY5 434 aa18.25■□□□□ 0.51
UBE2D3-228ENST00000508974 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
UBE2D3-228ENST00000508974 MYO5AQ9Y4I1 1855 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 MANSC4A6NHS7 340 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 ZBTB48P10074 688 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 TNNI3KQ59H18 835 aa18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 CEP85Q6P2H3 762 aa18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 MIGA2Q7L4E1 593 aa18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 SPATA5Q8NB90 893 aa18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 OPTNQ96CV9 577 aa18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 FPGT-TNNI3KV9GXZ4 949 aa18.24■□□□□ 0.51
UBE2D3-228ENST00000508974 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 CCDC85CA6NKD9 419 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 FKBP1CQ5VVH2 108 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 SPTY2D1Q68D10 685 aaPredicted RBP18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 WRNIP1Q96S55 665 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 DBNDD2Q9BQY9 259 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 SNRKQ9NRH2 765 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 CSADQ9Y600 493 aa18.23■□□□□ 0.51
UBE2D3-228ENST00000508974 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 UNCXA6NJT0 531 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 IGF2BP3O00425 579 aaKnown RBP eCLIP18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 ABCB7O75027 752 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 ARID4AP29374 1257 aaPredicted RBP18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 MCAMP43121 646 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 MAP3K9P80192 1104 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 MECOMQ03112 1051 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 IFNL1Q8IU54 200 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 FAM151AQ8WW52 585 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 OTUD5Q96G74 571 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 R3HDMLQ9H3Y0 253 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 FAM198AQ9UFP1 575 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 EXOC6BQ9Y2D4 811 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 MAST2Q6P0Q8 1798 aa18.22■□□□□ 0.51
UBE2D3-228ENST00000508974 MS4A1P11836 297 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 BTDP43251 543 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 PICALMQ13492 652 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 ZFPM1Q8IX07 1006 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 ZNF296Q8WUU4 475 aaPredicted RBP18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 BCL11AQ9H165 835 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 RAI14Q9P0K7 980 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 MROH7-TTC4A0A0A0MT08 1334 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 GAKO14976 1311 aa18.21■□□□□ 0.51
UBE2D3-228ENST00000508974 UQCRFS1P1P0C7P4 283 aa18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 RGS3P49796 1198 aa18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 DCAF15Q66K64 600 aa18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 SLF2Q8IX21 1173 aa18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 ZNF384Q8TF68 577 aa18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 HOOK2Q96ED9 719 aa18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 CCDC8Q9H0W5 538 aaPredicted RBP18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 SNCAIPQ9Y6H5 919 aa18.2■□□□□ 0.5
UBE2D3-228ENST00000508974 GPR25O00155 361 aa18.19■□□□□ 0.5
UBE2D3-228ENST00000508974 CCDC158Q5M9N0 1113 aa18.19■□□□□ 0.5
UBE2D3-228ENST00000508974 ZNF341Q9BYN7 854 aa18.19■□□□□ 0.5
UBE2D3-228ENST00000508974 GPR108Q9NPR9 543 aa18.19■□□□□ 0.5
UBE2D3-228ENST00000508974 LRP2BPQ9P2M1 347 aa18.19■□□□□ 0.5
UBE2D3-228ENST00000508974 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
UBE2D3-228ENST00000508974 APBB1O00213 710 aa18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 ALDH1A1P00352 501 aa18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 INPP5BP32019 993 aa18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 INHBEP58166 350 aa18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 CTU1Q7Z7A3 348 aaKnown RBP18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 PTPN18Q99952 460 aa18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
UBE2D3-228ENST00000508974 C20orf194Q5TEA3 1177 aa18.17■□□□□ 0.5
UBE2D3-228ENST00000508974 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
UBE2D3-228ENST00000508974 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
UBE2D3-228ENST00000508974 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms