RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CCDC158Q5M9N0 1113 aa22.29■■□□□ 1.16
CLDND1-220ENST00000508902 RGMBQ6NW40 437 aa22.29■■□□□ 1.16
CLDND1-220ENST00000508902 RASAL3Q86YV0 1011 aa22.29■■□□□ 1.16
CLDND1-220ENST00000508902 ZGPATQ8N5A5 531 aaKnown RBP22.29■■□□□ 1.16
CLDND1-220ENST00000508902 FAM163AQ96GL9 167 aaPredicted RBP22.29■■□□□ 1.16
CLDND1-220ENST00000508902 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
CLDND1-220ENST00000508902 FAM198AQ9UFP1 575 aa22.29■■□□□ 1.16
CLDND1-220ENST00000508902 LAMB1P07942 1786 aa22.29■■□□□ 1.16
CLDND1-220ENST00000508902 MROH7-TTC4A0A0A0MT08 1334 aa22.29■■□□□ 1.16
CLDND1-220ENST00000508902 SLC10A3P09131 477 aa22.28■■□□□ 1.16
CLDND1-220ENST00000508902 LDLRAD1Q5T700 205 aa22.28■■□□□ 1.16
CLDND1-220ENST00000508902 ERICH6Q7L0X2 663 aa22.28■■□□□ 1.16
CLDND1-220ENST00000508902 ADGRA1Q86SQ6 560 aa22.28■■□□□ 1.16
CLDND1-220ENST00000508902 DZIP1Q86YF9 867 aaKnown RBP22.28■■□□□ 1.16
CLDND1-220ENST00000508902 ZFPM1Q8IX07 1006 aa22.28■■□□□ 1.16
CLDND1-220ENST00000508902 FOCADQ5VW36 1801 aa22.27■■□□□ 1.16
CLDND1-220ENST00000508902 RHBDL3P58872 404 aa22.27■■□□□ 1.16
CLDND1-220ENST00000508902 MAP3K11Q16584 847 aa22.27■■□□□ 1.16
CLDND1-220ENST00000508902 SUPT16HQ9Y5B9 1047 aaKnown RBP22.27■■□□□ 1.16
CLDND1-220ENST00000508902 RPAP1Q9BWH6 1393 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-220ENST00000508902 BTDP43251 543 aa22.26■■□□□ 1.15
CLDND1-220ENST00000508902 FKBP1CQ5VVH2 108 aa22.26■■□□□ 1.15
CLDND1-220ENST00000508902 CLASRPQ8N2M8 674 aaKnown RBP22.26■■□□□ 1.15
CLDND1-220ENST00000508902 CLMNQ96JQ2 1002 aa22.26■■□□□ 1.15
CLDND1-220ENST00000508902 DDX4Q9NQI0 724 aaKnown RBP22.26■■□□□ 1.15
CLDND1-220ENST00000508902 WBP1LQ9NX94 342 aa22.26■■□□□ 1.15
CLDND1-220ENST00000508902 ANGEL1Q9UNK9 670 aaKnown RBP22.26■■□□□ 1.15
CLDND1-220ENST00000508902 SIPA1L1O43166 1804 aa22.26■■□□□ 1.15
CLDND1-220ENST00000508902 ATRNL1Q5VV63 1379 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 GPR75-ASB3A0A0A6YYF3 556 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 USP2O75604 605 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-220ENST00000508902 WDHD1O75717 1129 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-220ENST00000508902 ECE1P42892 770 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 TNFAIP1Q13829 316 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 SPTY2D1Q68D10 685 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-220ENST00000508902 FAM83AQ86UY5 434 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 EXOC6Q8TAG9 804 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 EDC3Q96F86 508 aaKnown RBP22.25■■□□□ 1.15
CLDND1-220ENST00000508902 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 USP40Q9NVE5 1235 aa22.25■■□□□ 1.15
CLDND1-220ENST00000508902 AK9Q5TCS8 1911 aa22.24■■□□□ 1.15
CLDND1-220ENST00000508902 FOXN1O15353 648 aa22.24■■□□□ 1.15
CLDND1-220ENST00000508902 SLURP2P0DP57 97 aa22.24■■□□□ 1.15
CLDND1-220ENST00000508902 ZNF157P51786 506 aaPredicted RBP22.24■■□□□ 1.15
CLDND1-220ENST00000508902 SH3BP5LQ7L8J4 393 aa22.24■■□□□ 1.15
CLDND1-220ENST00000508902 LRRCC1Q9C099 1032 aa22.24■■□□□ 1.15
CLDND1-220ENST00000508902 RAI14Q9P0K7 980 aa22.24■■□□□ 1.15
CLDND1-220ENST00000508902 NF2P35240 595 aa22.23■■□□□ 1.15
CLDND1-220ENST00000508902 TCP10Q12799 353 aa22.23■■□□□ 1.15
CLDND1-220ENST00000508902 TTLL12Q14166 644 aaPredicted RBP22.23■■□□□ 1.15
CLDND1-220ENST00000508902 MYH7P12883 1935 aa22.22■■□□□ 1.15
CLDND1-220ENST00000508902 RGS3P49796 1198 aa22.22■■□□□ 1.15
CLDND1-220ENST00000508902 FAM151AQ8WW52 585 aa22.22■■□□□ 1.15
CLDND1-220ENST00000508902 IDI2Q9BXS1 227 aa22.22■■□□□ 1.15
CLDND1-220ENST00000508902 LRP2BPQ9P2M1 347 aa22.22■■□□□ 1.15
CLDND1-220ENST00000508902 IFIT2P09913 472 aaKnown RBP22.21■■□□□ 1.15
CLDND1-220ENST00000508902 GJA5P36382 358 aa22.21■■□□□ 1.15
CLDND1-220ENST00000508902 MAP2K2P36507 400 aa22.21■■□□□ 1.15
CLDND1-220ENST00000508902 TNNI2P48788 182 aa22.21■■□□□ 1.15
CLDND1-220ENST00000508902 SUPT20HL1Q3ZLR7 823 aa22.21■■□□□ 1.15
CLDND1-220ENST00000508902 OTUD7AQ8TE49 926 aaPredicted RBP22.21■■□□□ 1.15
CLDND1-220ENST00000508902 TMOD2Q9NZR1 351 aa22.21■■□□□ 1.15
CLDND1-220ENST00000508902 KIF23Q02241 960 aaPredicted RBP22.2■■□□□ 1.14
CLDND1-220ENST00000508902 NOGQ13253 232 aa22.2■■□□□ 1.14
CLDND1-220ENST00000508902 TSHZ3Q63HK5 1081 aa22.2■■□□□ 1.14
CLDND1-220ENST00000508902 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.2■■□□□ 1.14
CLDND1-220ENST00000508902 ARMC9Q7Z3E5 817 aa22.2■■□□□ 1.14
CLDND1-220ENST00000508902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.2■■□□□ 1.14
CLDND1-220ENST00000508902 DDX60LQ5H9U9 1706 aaKnown RBP22.2■■□□□ 1.14
CLDND1-220ENST00000508902 CHGBP05060 677 aa22.19■■□□□ 1.14
CLDND1-220ENST00000508902 NAA16Q6N069 864 aaPredicted RBP22.19■■□□□ 1.14
CLDND1-220ENST00000508902 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.19■■□□□ 1.14
CLDND1-220ENST00000508902 SH3RF3Q8TEJ3 882 aaPredicted RBP22.19■■□□□ 1.14
CLDND1-220ENST00000508902 CCDC102AQ96A19 550 aa22.19■■□□□ 1.14
CLDND1-220ENST00000508902 DDTLA6NHG4 134 aaPredicted RBP22.18■■□□□ 1.14
CLDND1-220ENST00000508902 ATP5JP18859 108 aa22.18■■□□□ 1.14
CLDND1-220ENST00000508902 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
CLDND1-220ENST00000508902 MKRN3Q13064 507 aaKnown RBP22.18■■□□□ 1.14
CLDND1-220ENST00000508902 SLFNL1Q499Z3 407 aa22.18■■□□□ 1.14
CLDND1-220ENST00000508902 CNKSR2Q8WXI2 1034 aa22.18■■□□□ 1.14
CLDND1-220ENST00000508902 BOLA2Q9H3K6 86 aa22.18■■□□□ 1.14
CLDND1-220ENST00000508902 SALL3Q9BXA9 1300 aa22.17■■□□□ 1.14
CLDND1-220ENST00000508902 PPP1R12BO60237 982 aaPredicted RBP22.17■■□□□ 1.14
CLDND1-220ENST00000508902 IDH1O75874 414 aaKnown RBP22.17■■□□□ 1.14
CLDND1-220ENST00000508902 DYNLL1P63167 89 aaKnown RBP22.17■■□□□ 1.14
CLDND1-220ENST00000508902 GSTO1P78417 241 aa22.17■■□□□ 1.14
CLDND1-220ENST00000508902 HDAC1Q13547 482 aaPredicted RBP22.17■■□□□ 1.14
CLDND1-220ENST00000508902 SLF2Q8IX21 1173 aa22.17■■□□□ 1.14
CLDND1-220ENST00000508902 CSRNP1Q96S65 589 aa22.17■■□□□ 1.14
CLDND1-220ENST00000508902 DNAJC2Q99543 621 aaKnown RBP22.17■■□□□ 1.14
CLDND1-220ENST00000508902 AATFQ9NY61 560 aaKnown RBP eCLIP22.17■■□□□ 1.14
CLDND1-220ENST00000508902 GOLIM4O00461 696 aa22.16■■□□□ 1.14
CLDND1-220ENST00000508902 ENTPD3O75355 529 aa22.16■■□□□ 1.14
CLDND1-220ENST00000508902 HSPA8P11142 646 aaKnown RBP22.16■■□□□ 1.14
CLDND1-220ENST00000508902 PPP4CP60510 307 aa22.16■■□□□ 1.14
CLDND1-220ENST00000508902 PICALMQ13492 652 aa22.16■■□□□ 1.14
CLDND1-220ENST00000508902 SPRYD7Q5W111 196 aa22.16■■□□□ 1.14
CLDND1-220ENST00000508902 MIGA2Q7L4E1 593 aa22.16■■□□□ 1.14
CLDND1-220ENST00000508902 MAGEB6Q8N7X4 407 aa22.16■■□□□ 1.14
CLDND1-220ENST00000508902 TSKSQ9UJT2 592 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms