RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-213ENST00000508848 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 ENTPD3O75355 529 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 PLCG2P16885 1265 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 ZAP70P43403 619 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 RASA3Q14644 834 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 LDLRAD1Q5T700 205 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 ZNF384Q8TF68 577 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 FAM151AQ8WW52 585 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 TEPSINQ96N21 525 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
POLR2J3-213ENST00000508848 MROH7-TTC4A0A0A0MT08 1334 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 TTC41PQ6P2S7 1318 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 BAG3O95817 575 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 MAP3K10Q02779 954 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 MAP3K12Q12852 859 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 ARMC9Q7Z3E5 817 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 HAUS7Q99871 368 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
POLR2J3-213ENST00000508848 AK9Q5TCS8 1911 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 CLRN2A0PK11 232 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 RHBDL3P58872 404 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 DIXDC1Q155Q3 683 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 PI16Q6UXB8 463 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 TBC1D9Q6ZT07 1266 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 GPATCH3Q96I76 525 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 USP40Q9NVE5 1235 aa12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 ABT1Q9ULW3 272 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 COL2A1P02458 1487 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-213ENST00000508848 MYH7P12883 1935 aa12.9□□□□□ -0.35
POLR2J3-213ENST00000508848 AOX1Q06278 1338 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 HUNKP57058 714 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 NAA16Q6N069 864 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 RGMBQ6NW40 437 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 VEZTQ9HBM0 779 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 RAI14Q9P0K7 980 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 STAP2Q9UGK3 403 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 LAMB1P07942 1786 aa12.89□□□□□ -0.35
POLR2J3-213ENST00000508848 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 APBB1O00213 710 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 ERC2O15083 957 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 VEGFBP49765 207 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 HTRA3P83110 453 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 NOGQ13253 232 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 CAPNS2Q96L46 248 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 PIH1D3Q9NQM4 214 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 ATRNL1Q5VV63 1379 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 THSD7BQ9C0I4 1608 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 SALL3Q9BXA9 1300 aa12.88□□□□□ -0.35
POLR2J3-213ENST00000508848 CDK5RAP2Q96SN8 1893 aa12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 TBC1D12O60347 775 aa12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 GLRX3O76003 335 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 BTDP43251 543 aa12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 IREB2P48200 963 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 DCAF15Q66K64 600 aa12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 DLK2Q6UY11 383 aa12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 PAG1Q9NWQ8 432 aa12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 ZNF112Q9UJU3 913 aa12.87□□□□□ -0.35
POLR2J3-213ENST00000508848 FAM155AB1AL88 458 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 TCP10L2B9ZVM9 353 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 INHBEP58166 350 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 LRRFIP1Q32MZ4 808 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 ANKRD45Q5TZF3 282 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 PRAMEF18Q5VWM3 479 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 ZSCAN25Q6NSZ9 544 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 ANKRD13AQ8IZ07 590 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 DHX36Q9H2U1 1008 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 SSC5DA1L4H1 1573 aa12.86□□□□□ -0.35
POLR2J3-213ENST00000508848 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 IGHDP01880 384 aa12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 SLC10A3P09131 477 aa12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 CYP7A1P22680 504 aa12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 NUCB1Q02818 461 aa12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 SLC9C2Q5TAH2 1124 aa12.85□□□□□ -0.35
POLR2J3-213ENST00000508848 METTL16Q86W50 562 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms