RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 ZNF202O95125 648 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 DPCR1Q3MIW9 517 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 IFNL3Q8IZI9 196 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 ZNF710Q8N1W2 664 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 MRFAP1L1Q96HT8 127 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
LIN54-207ENST00000508171 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 EPB41L4AQ9HCS5 686 aaPredicted RBP12.7□□□□□ -0.38
LIN54-207ENST00000508171 ZSWIM5Q9P217 1185 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 PRKAB2O43741 272 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 MBD4O95243 580 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 CDC25BP30305 580 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 KRT40Q6A162 431 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 LRRC8AQ8IWT6 810 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
LIN54-207ENST00000508171 MROH5Q6ZUA9 1318 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 NTRK3Q16288 839 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
LIN54-207ENST00000508171 NFXL1Q6ZNB6 911 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 VPS37DQ86XT2 251 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 CEP57L1Q8IYX8 460 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 STK11IPQ8N1F8 1099 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
LIN54-207ENST00000508171 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
LIN54-207ENST00000508171 RANBP6O60518 1105 aaKnown RBP12.68□□□□□ -0.38
LIN54-207ENST00000508171 PFKFB1P16118 471 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 BCAMP50895 628 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
LIN54-207ENST00000508171 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 ISM2Q6H9L7 571 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 MROH7-TTC4A0A0A0MT08 1334 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 ZBTB43O43298 467 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 SLC39A14Q15043 492 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 ACSBG1Q96GR2 724 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 CHD4Q14839 1912 aa12.68□□□□□ -0.38
LIN54-207ENST00000508171 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 SLC5A1P13866 664 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 MAP3K12Q12852 859 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 TMEM87BQ96K49 555 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 MAP7D2Q96T17 732 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 NAPBQ9H115 298 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 SLC3A2P08195 630 aaKnown RBP12.67□□□□□ -0.38
LIN54-207ENST00000508171 CMA1P23946 247 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
LIN54-207ENST00000508171 ALX1Q15699 326 aa12.67□□□□□ -0.38
LIN54-207ENST00000508171 NAT10Q9H0A0 1025 aaKnown RBP12.67□□□□□ -0.38
LIN54-207ENST00000508171 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
LIN54-207ENST00000508171 GOLGA8AA7E2F4 631 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 IFIT3O14879 490 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 ATP6V1AP38606 617 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 IARSP41252 1262 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 SGMS1Q86VZ5 419 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 ECM29Q5VYK3 1845 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 WTIPA6NIX2 430 aaPredicted RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 USP27XA6NNY8 438 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 CDKL5O76039 1030 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 PTPAQ15257 358 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 LCORLQ8N3X6 602 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 MIGA1Q8NAN2 632 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 CLIC6Q96NY7 704 aa12.66□□□□□ -0.38
LIN54-207ENST00000508171 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
LIN54-207ENST00000508171 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 TNNT1P13805 278 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 SHC4Q6S5L8 630 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
LIN54-207ENST00000508171 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 SLC12A7Q9Y666 1083 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 DOCK2Q92608 1830 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 SKILP12757 684 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 TPD52L1Q16890 204 aaPredicted RBP12.65□□□□□ -0.38
LIN54-207ENST00000508171 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
LIN54-207ENST00000508171 ARAP2Q8WZ64 1704 aa12.65□□□□□ -0.38
LIN54-207ENST00000508171 COL14A1Q05707 1796 aaKnown RBP12.65□□□□□ -0.38
LIN54-207ENST00000508171 CCDC69A6NI79 296 aa12.65□□□□□ -0.39
LIN54-207ENST00000508171 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.39
LIN54-207ENST00000508171 LIFRP42702 1097 aa12.65□□□□□ -0.39
LIN54-207ENST00000508171 ITPK1Q13572 414 aa12.65□□□□□ -0.39
LIN54-207ENST00000508171 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.39
LIN54-207ENST00000508171 AK7Q96M32 723 aa12.65□□□□□ -0.39
LIN54-207ENST00000508171 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.65□□□□□ -0.39
LIN54-207ENST00000508171 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms