RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 COL26A1Q96A83 441 aa8.82□□□□□ -1
CLCN3-206ENST00000507875 CHL1O00533 1208 aa8.82□□□□□ -1
CLCN3-206ENST00000507875 SPTY2D1Q68D10 685 aaPredicted RBP8.82□□□□□ -1
CLCN3-206ENST00000507875 APBB1IPQ7Z5R6 666 aaPredicted RBP8.82□□□□□ -1
CLCN3-206ENST00000507875 AGERQ15109 404 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 ETFBKMTQ8IXQ9 262 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 BAP1Q92560 729 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 CHPF2Q9P2E5 772 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 SPATA31A1Q5TZJ5 1347 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 TPD52L2O43399 206 aaKnown RBP8.81□□□□□ -1
CLCN3-206ENST00000507875 TLL1O43897 1013 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 RNPC3Q96LT9 517 aaKnown RBP8.81□□□□□ -1
CLCN3-206ENST00000507875 OSBPL7Q9BZF2 842 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 ZNF408Q9H9D4 720 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 DISP2A7MBM2 1401 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 MEGF6O75095 1541 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 PAPPAQ13219 1627 aa8.81□□□□□ -1
CLCN3-206ENST00000507875 PTMAP06454 111 aaKnown RBP8.8□□□□□ -1
CLCN3-206ENST00000507875 MCCD1P59942 119 aaPredicted RBP8.8□□□□□ -1
CLCN3-206ENST00000507875 ZNF530Q6P9A1 599 aaPredicted RBP8.8□□□□□ -1
CLCN3-206ENST00000507875 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 IFNL2Q8IZJ0 200 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 ZNF654Q8IZM8 581 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 EXOC6Q8TAG9 804 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 GPKOWQ92917 476 aaPredicted RBP eCLIP8.8□□□□□ -1
CLCN3-206ENST00000507875 ALKBH8Q96BT7 664 aaKnown RBP8.8□□□□□ -1
CLCN3-206ENST00000507875 N4BP2Q86UW6 1770 aaPredicted RBP8.8□□□□□ -1
CLCN3-206ENST00000507875 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 IL2RBP14784 551 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 CLCN6P51797 869 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 TAF7Q15545 349 aaPredicted RBP8.8□□□□□ -1
CLCN3-206ENST00000507875 VPS9D1Q9Y2B5 631 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 AK5Q9Y6K8 562 aa8.8□□□□□ -1
CLCN3-206ENST00000507875 FAM221BA6H8Z2 402 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 HOXB7P09629 217 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 GJA8P48165 433 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 USPL1Q5W0Q7 1092 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 LAMB4A4D0S4 1761 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 UBR2Q8IWV8 1755 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 HSD3B2P26439 372 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 SERINC3Q13530 473 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 PDE3AQ14432 1141 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 GJD3Q8N144 294 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 USHBP1Q8N6Y0 703 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 ARMC2Q8NEN0 867 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 FAN1Q9Y2M0 1017 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 EP400Q96L91 3159 aa8.79□□□□□ -1
CLCN3-206ENST00000507875 KIF16BQ96L93 1317 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 M0R2N6 131 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 RNMTO43148 476 aaKnown RBP8.78□□□□□ -1
CLCN3-206ENST00000507875 PPP1R12BO60237 982 aaPredicted RBP8.78□□□□□ -1
CLCN3-206ENST00000507875 ETFBP38117 255 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 BAG6P46379 1132 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 GDF10P55107 478 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 DCAF5Q96JK2 942 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 MBIPQ9NS73 344 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
CLCN3-206ENST00000507875 PLIN1O60240 522 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 PHKG2P15735 406 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 GTF2E1P29083 439 aaPredicted RBP8.78□□□□□ -1
CLCN3-206ENST00000507875 RARSP54136 660 aaKnown RBP8.78□□□□□ -1
CLCN3-206ENST00000507875 EXOSC9Q06265 439 aaKnown RBP8.78□□□□□ -1
CLCN3-206ENST00000507875 PLEKHG6Q3KR16 790 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.78□□□□□ -1
CLCN3-206ENST00000507875 FAM196AQ6ZSG2 479 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 SLC10A4Q96EP9 437 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 CITED4Q96RK1 184 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 ITGB4P16144 1822 aa8.78□□□□□ -1
CLCN3-206ENST00000507875 IPO8O15397 1037 aaKnown RBP8.77□□□□□ -1.01
CLCN3-206ENST00000507875 AMPD3Q01432 767 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 IL17REQ8NFR9 667 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 ZCRB1Q8TBF4 217 aaKnown RBP8.77□□□□□ -1.01
CLCN3-206ENST00000507875 EDEM1Q92611 657 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 ARHGAP45Q92619 1136 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 ETNK1Q9HBU6 452 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 PCDHB3Q9Y5E6 796 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 ERVV-2B6SEH9 535 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 POTEB2H3BUK9 544 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 TEFQ10587 303 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 HS2ST1Q7LGA3 356 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 SPSB2Q99619 263 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 C2orf49Q9BVC5 232 aaPredicted RBP8.77□□□□□ -1.01
CLCN3-206ENST00000507875 IRF2BPLQ9H1B7 796 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 RAB6BQ9NRW1 208 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 CICQ96RK0 1608 aaPredicted RBP8.77□□□□□ -1.01
CLCN3-206ENST00000507875 TNS2Q63HR2 1409 aa8.77□□□□□ -1.01
CLCN3-206ENST00000507875 MMP16P51512 607 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 COPS2P61201 443 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 MCM10Q7L590 875 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 EPS8L3Q8TE67 593 aaKnown RBP8.76□□□□□ -1.01
CLCN3-206ENST00000507875 TSPYL4Q9UJ04 414 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 ZNF831Q5JPB2 1677 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 THSD7AQ9UPZ6 1657 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 BRWD3Q6RI45 1802 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 VAMP4O75379 141 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 TWISTNBQ3B726 338 aaPredicted RBP8.76□□□□□ -1.01
CLCN3-206ENST00000507875 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
CLCN3-206ENST00000507875 ALG1LQ6GMV1 187 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms