RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 SH3RF3Q8TEJ3 882 aaPredicted RBP20.85■□□□□ 0.93
RNF4-209ENST00000507784 NACAP1Q9BZK3 213 aa20.85■□□□□ 0.93
RNF4-209ENST00000507784 ADAMTSL1Q8N6G6 1762 aa20.85■□□□□ 0.93
RNF4-209ENST00000507784 GAKO14976 1311 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 FZD9O00144 591 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 SLC27A2O14975 620 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 GRIN3BO60391 1043 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 USP5P45974 858 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 TDO2P48775 406 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 PPP4CP60510 307 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 HHIPL2Q6UWX4 724 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 IFNL3Q8IZI9 196 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 AGBL3Q8NEM8 1001 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 SDR42E1Q8WUS8 393 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 PALD1Q9ULE6 856 aa20.84■□□□□ 0.93
RNF4-209ENST00000507784 GSG1L2A8MUP6 293 aa20.83■□□□□ 0.93
RNF4-209ENST00000507784 FGAP02671 866 aa20.83■□□□□ 0.93
RNF4-209ENST00000507784 PLCG2P16885 1265 aa20.83■□□□□ 0.93
RNF4-209ENST00000507784 ZKSCAN1P17029 563 aaPredicted RBP20.83■□□□□ 0.93
RNF4-209ENST00000507784 HDLBPQ00341 1268 aaKnown RBP20.83■□□□□ 0.93
RNF4-209ENST00000507784 OGFOD1Q8N543 542 aa20.83■□□□□ 0.93
RNF4-209ENST00000507784 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
RNF4-209ENST00000507784 NAPBQ9H115 298 aa20.83■□□□□ 0.93
RNF4-209ENST00000507784 USP40Q9NVE5 1235 aa20.83■□□□□ 0.93
RNF4-209ENST00000507784 FOXP2O15409 715 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 CFAP100Q494V2 611 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 C9orf131Q5VYM1 1079 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 CERS3Q8IU89 383 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 TEX11Q8IYF3 940 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 GMLQ99445 158 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 MRIQ9BWK5 157 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 SNX14Q9Y5W7 946 aa20.82■□□□□ 0.92
RNF4-209ENST00000507784 RPAP1Q9BWH6 1393 aaPredicted RBP20.82■□□□□ 0.92
RNF4-209ENST00000507784 ZNF541Q9H0D2 1346 aa20.81■□□□□ 0.92
RNF4-209ENST00000507784 USP17L8P0C7I0 530 aa20.81■□□□□ 0.92
RNF4-209ENST00000507784 ALX1Q15699 326 aa20.81■□□□□ 0.92
RNF4-209ENST00000507784 IMMTQ16891 758 aaKnown RBP20.81■□□□□ 0.92
RNF4-209ENST00000507784 RASEFQ8IZ41 740 aa20.81■□□□□ 0.92
RNF4-209ENST00000507784 TGFBRAP1Q8WUH2 860 aa20.81■□□□□ 0.92
RNF4-209ENST00000507784 SERPINA10Q9UK55 444 aa20.81■□□□□ 0.92
RNF4-209ENST00000507784 ZNF213O14771 459 aa20.8■□□□□ 0.92
RNF4-209ENST00000507784 ANP32AP39687 249 aaKnown RBP20.8■□□□□ 0.92
RNF4-209ENST00000507784 ANAPC15P60006 121 aa20.8■□□□□ 0.92
RNF4-209ENST00000507784 HAND2P61296 217 aa20.8■□□□□ 0.92
RNF4-209ENST00000507784 ZDHHC15Q96MV8 337 aa20.8■□□□□ 0.92
RNF4-209ENST00000507784 EPB41L4AQ9HCS5 686 aaPredicted RBP20.8■□□□□ 0.92
RNF4-209ENST00000507784 PCDHAC2Q9Y5I4 1007 aa20.8■□□□□ 0.92
RNF4-209ENST00000507784 BAZ2AQ9UIF9 1905 aaKnown RBP20.8■□□□□ 0.92
RNF4-209ENST00000507784 TIAM2Q8IVF5 1701 aa20.79■□□□□ 0.92
RNF4-209ENST00000507784 CYP21A2P08686 494 aa20.79■□□□□ 0.92
RNF4-209ENST00000507784 RPS12P25398 132 aaKnown RBP20.79■□□□□ 0.92
RNF4-209ENST00000507784 GMPSP49915 693 aaPredicted RBP20.79■□□□□ 0.92
RNF4-209ENST00000507784 DLGAP5Q15398 846 aa20.79■□□□□ 0.92
RNF4-209ENST00000507784 MAPKAPK5Q8IW41 473 aa20.79■□□□□ 0.92
RNF4-209ENST00000507784 ATP8A2Q9NTI2 1148 aa20.79■□□□□ 0.92
RNF4-209ENST00000507784 CDK5RAP2Q96SN8 1893 aa20.79■□□□□ 0.92
RNF4-209ENST00000507784 MINDY4BA8MYZ0 360 aa20.78■□□□□ 0.92
RNF4-209ENST00000507784 RHBDL3P58872 404 aa20.78■□□□□ 0.92
RNF4-209ENST00000507784 APOBEC3HQ6NTF7 200 aaKnown RBP20.78■□□□□ 0.92
RNF4-209ENST00000507784 CDC42EP5Q6NZY7 148 aa20.78■□□□□ 0.92
RNF4-209ENST00000507784 KCNB2Q92953 911 aa20.78■□□□□ 0.92
RNF4-209ENST00000507784 KIF2CQ99661 725 aa20.78■□□□□ 0.92
RNF4-209ENST00000507784 ECM29Q5VYK3 1845 aa20.77■□□□□ 0.92
RNF4-209ENST00000507784 PICALMQ13492 652 aa20.77■□□□□ 0.92
RNF4-209ENST00000507784 RBM26Q5T8P6 1007 aaKnown RBP20.77■□□□□ 0.92
RNF4-209ENST00000507784 GIMAP6Q6P9H5 292 aa20.77■□□□□ 0.92
RNF4-209ENST00000507784 JAKMIP1Q96N16 626 aaKnown RBP20.77■□□□□ 0.92
RNF4-209ENST00000507784 DCP1AQ9NPI6 582 aaPredicted RBP20.77■□□□□ 0.92
RNF4-209ENST00000507784 NAV1Q8NEY1 1877 aa20.77■□□□□ 0.92
RNF4-209ENST00000507784 KRT32Q14532 448 aa20.76■□□□□ 0.91
RNF4-209ENST00000507784 RABEP1Q15276 862 aa20.76■□□□□ 0.91
RNF4-209ENST00000507784 STK11IPQ8N1F8 1099 aa20.76■□□□□ 0.91
RNF4-209ENST00000507784 PRMT6Q96LA8 375 aaPredicted RBP20.76■□□□□ 0.91
RNF4-209ENST00000507784 TDRD3Q9H7E2 651 aaKnown RBP20.76■□□□□ 0.91
RNF4-209ENST00000507784 MCM9Q9NXL9 1143 aa20.76■□□□□ 0.91
RNF4-209ENST00000507784 SAP30BPQ9UHR5 308 aaKnown RBP20.76■□□□□ 0.91
RNF4-209ENST00000507784 CNOT7Q9UIV1 285 aaKnown RBP20.76■□□□□ 0.91
RNF4-209ENST00000507784 TAF6LQ9Y6J9 622 aa20.76■□□□□ 0.91
RNF4-209ENST00000507784 ZMYM6O95789 1325 aa20.76■□□□□ 0.91
RNF4-209ENST00000507784 SHTN1A0MZ66 631 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 USP17L12C9JPN9 530 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 USP17L21D6R901 530 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 PSMA5P28066 241 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 ADCK5Q3MIX3 580 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 MICALL2Q8IY33 904 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 AMOTL1Q8IY63 956 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 GPC2Q8N158 579 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 DPF2Q92785 391 aa20.75■□□□□ 0.91
RNF4-209ENST00000507784 MYH1P12882 1939 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 LAMA4Q16363 1823 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 DCAF8L1A6NGE4 600 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 E7EWF7 191 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 POLR3DP05423 398 aaPredicted RBP20.74■□□□□ 0.91
RNF4-209ENST00000507784 CASTP20810 708 aaKnown RBP20.74■□□□□ 0.91
RNF4-209ENST00000507784 PPARAQ07869 468 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 CTR9Q6PD62 1173 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 MYOZ2Q9NPC6 264 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms