RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ZBED3Q96IU2 234 aaPredicted RBP24.18■■□□□ 1.46
USP53-203ENST00000507597 PRMT6Q96LA8 375 aaPredicted RBP24.18■■□□□ 1.46
USP53-203ENST00000507597 USP40Q9NVE5 1235 aa24.18■■□□□ 1.46
USP53-203ENST00000507597 PITPNM2Q9BZ72 1349 aa24.17■■□□□ 1.46
USP53-203ENST00000507597 SHTN1A0MZ66 631 aa24.17■■□□□ 1.46
USP53-203ENST00000507597 APOBEC3HQ6NTF7 200 aaKnown RBP24.17■■□□□ 1.46
USP53-203ENST00000507597 APOBEC3FQ8IUX4 373 aaKnown RBP24.17■■□□□ 1.46
USP53-203ENST00000507597 AIDAQ96BJ3 306 aa24.17■■□□□ 1.46
USP53-203ENST00000507597 NBPF9Q3BBW0 867 aa24.16■■□□□ 1.46
USP53-203ENST00000507597 FKBP1CQ5VVH2 108 aa24.16■■□□□ 1.46
USP53-203ENST00000507597 HELLSQ9NRZ9 838 aa24.16■■□□□ 1.46
USP53-203ENST00000507597 AATFQ9NY61 560 aaKnown RBP eCLIP24.16■■□□□ 1.46
USP53-203ENST00000507597 TCRBV5S4A2TA0A5A2 114 aa24.15■■□□□ 1.46
USP53-203ENST00000507597 SPDYE2Q495Y8 402 aa24.15■■□□□ 1.46
USP53-203ENST00000507597 SULF1Q8IWU6 871 aa24.15■■□□□ 1.46
USP53-203ENST00000507597 DDRGK1Q96HY6 314 aa24.15■■□□□ 1.46
USP53-203ENST00000507597 TDRD3Q9H7E2 651 aaKnown RBP24.15■■□□□ 1.46
USP53-203ENST00000507597 ZNF70Q9UC06 446 aaPredicted RBP24.15■■□□□ 1.46
USP53-203ENST00000507597 PGAP2Q9UHJ9 254 aa24.15■■□□□ 1.46
USP53-203ENST00000507597 MAST2Q6P0Q8 1798 aa24.15■■□□□ 1.46
USP53-203ENST00000507597 DOCK2Q92608 1830 aa24.14■■□□□ 1.46
USP53-203ENST00000507597 GNAT2P19087 354 aa24.14■■□□□ 1.45
USP53-203ENST00000507597 HIRAP54198 1017 aaPredicted RBP24.14■■□□□ 1.45
USP53-203ENST00000507597 ZNF384Q8TF68 577 aa24.14■■□□□ 1.45
USP53-203ENST00000507597 CRNKL1Q9BZJ0 848 aaKnown RBP24.14■■□□□ 1.45
USP53-203ENST00000507597 VEZTQ9HBM0 779 aa24.14■■□□□ 1.45
USP53-203ENST00000507597 ZMYM1Q5SVZ6 1142 aa24.13■■□□□ 1.45
USP53-203ENST00000507597 ANGEL2Q5VTE6 544 aaKnown RBP24.13■■□□□ 1.45
USP53-203ENST00000507597 CDC42EP5Q6NZY7 148 aa24.13■■□□□ 1.45
USP53-203ENST00000507597 CDC37L1Q7L3B6 337 aa24.13■■□□□ 1.45
USP53-203ENST00000507597 TEX11Q8IYF3 940 aa24.13■■□□□ 1.45
USP53-203ENST00000507597 MIGA1Q8NAN2 632 aa24.13■■□□□ 1.45
USP53-203ENST00000507597 GGA3Q9NZ52 723 aa24.13■■□□□ 1.45
USP53-203ENST00000507597 PPP2R3BQ9Y5P8 575 aa24.13■■□□□ 1.45
USP53-203ENST00000507597 MYH2Q9UKX2 1941 aa24.12■■□□□ 1.45
USP53-203ENST00000507597 EGFRP00533 1210 aa24.12■■□□□ 1.45
USP53-203ENST00000507597 MCMDC2Q4G0Z9 681 aa24.12■■□□□ 1.45
USP53-203ENST00000507597 CLRN2A0PK11 232 aa24.11■■□□□ 1.45
USP53-203ENST00000507597 EIF5BO60841 1220 aaKnown RBP24.11■■□□□ 1.45
USP53-203ENST00000507597 NPM3O75607 178 aaKnown RBP24.11■■□□□ 1.45
USP53-203ENST00000507597 TOMM70O94826 608 aa24.11■■□□□ 1.45
USP53-203ENST00000507597 USP5P45974 858 aa24.11■■□□□ 1.45
USP53-203ENST00000507597 CHADLQ6NUI6 762 aa24.11■■□□□ 1.45
USP53-203ENST00000507597 FAM83AQ86UY5 434 aa24.11■■□□□ 1.45
USP53-203ENST00000507597 IDI2Q9BXS1 227 aa24.11■■□□□ 1.45
USP53-203ENST00000507597 KIF3CO14782 793 aa24.1■■□□□ 1.45
USP53-203ENST00000507597 ADGRA1Q86SQ6 560 aa24.1■■□□□ 1.45
USP53-203ENST00000507597 SKAP1Q86WV1 359 aa24.1■■□□□ 1.45
USP53-203ENST00000507597 SMC1BQ8NDV3 1235 aa24.1■■□□□ 1.45
USP53-203ENST00000507597 HOOK2Q96ED9 719 aa24.1■■□□□ 1.45
USP53-203ENST00000507597 ENTPD3O75355 529 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 MBD4O95243 580 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 RHBDL3P58872 404 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 KRT26Q7Z3Y9 468 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 AMOTL1Q8IY63 956 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 RBM46Q8TBY0 533 aaKnown RBP24.09■■□□□ 1.45
USP53-203ENST00000507597 OSBP2Q969R2 916 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 RIOK1Q9BRS2 568 aaKnown RBP24.09■■□□□ 1.45
USP53-203ENST00000507597 PUS7LQ9H0K6 701 aaKnown RBP24.09■■□□□ 1.45
USP53-203ENST00000507597 PCDHAC2Q9Y5I4 1007 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 RAD50Q92878 1312 aa24.09■■□□□ 1.45
USP53-203ENST00000507597 RPAP1Q9BWH6 1393 aaPredicted RBP24.08■■□□□ 1.45
USP53-203ENST00000507597 CDC45O75419 566 aa24.08■■□□□ 1.45
USP53-203ENST00000507597 DYNLL1P63167 89 aaKnown RBP24.08■■□□□ 1.45
USP53-203ENST00000507597 CWC27Q6UX04 472 aaKnown RBP24.08■■□□□ 1.45
USP53-203ENST00000507597 SH3RF3Q8TEJ3 882 aaPredicted RBP24.08■■□□□ 1.45
USP53-203ENST00000507597 NACAP1Q9BZK3 213 aa24.08■■□□□ 1.45
USP53-203ENST00000507597 ATP8A2Q9NTI2 1148 aa24.08■■□□□ 1.45
USP53-203ENST00000507597 TCP10L2B9ZVM9 353 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 GPAA1O43292 621 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 CHMLP26374 656 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 NF2P35240 595 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 NMIQ13287 307 aaPredicted RBP24.07■■□□□ 1.44
USP53-203ENST00000507597 FAM151AQ8WW52 585 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 ARMT1Q9H993 441 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 SLC4A4Q9Y6R1 1079 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 MYH7P12883 1935 aa24.07■■□□□ 1.44
USP53-203ENST00000507597 SUPT20HL1Q3ZLR7 823 aa24.06■■□□□ 1.44
USP53-203ENST00000507597 GIMAP6Q6P9H5 292 aa24.06■■□□□ 1.44
USP53-203ENST00000507597 TGFBRAP1Q8WUH2 860 aa24.06■■□□□ 1.44
USP53-203ENST00000507597 STRBPQ96SI9 672 aaKnown RBP24.06■■□□□ 1.44
USP53-203ENST00000507597 DEFB129Q9H1M3 183 aa24.06■■□□□ 1.44
USP53-203ENST00000507597 DHX36Q9H2U1 1008 aaKnown RBP24.06■■□□□ 1.44
USP53-203ENST00000507597 MYO5AQ9Y4I1 1855 aaKnown RBP24.06■■□□□ 1.44
USP53-203ENST00000507597 PATL2C9JE40 543 aaKnown RBP24.05■■□□□ 1.44
USP53-203ENST00000507597 FSTL1Q12841 308 aa24.05■■□□□ 1.44
USP53-203ENST00000507597 PICALMQ13492 652 aa24.05■■□□□ 1.44
USP53-203ENST00000507597 RASA3Q14644 834 aa24.05■■□□□ 1.44
USP53-203ENST00000507597 LCORLQ8N3X6 602 aa24.05■■□□□ 1.44
USP53-203ENST00000507597 FAM227BQ96M60 508 aa24.05■■□□□ 1.44
USP53-203ENST00000507597 AK9Q5TCS8 1911 aa24.05■■□□□ 1.44
USP53-203ENST00000507597 WDHD1O75717 1129 aaPredicted RBP24.04■■□□□ 1.44
USP53-203ENST00000507597 APPP05067 770 aa24.04■■□□□ 1.44
USP53-203ENST00000507597 MAP1SQ66K74 1059 aaPredicted RBP24.04■■□□□ 1.44
USP53-203ENST00000507597 KIAA1211Q6ZU35 1233 aa24.04■■□□□ 1.44
USP53-203ENST00000507597 ZSCAN29Q8IWY8 852 aaPredicted RBP24.04■■□□□ 1.44
USP53-203ENST00000507597 CCDC171Q6TFL3 1326 aa24.04■■□□□ 1.44
USP53-203ENST00000507597 A0A0D9SFI3 127 aa24.03■■□□□ 1.44
USP53-203ENST00000507597 M0R2C6 588 aa24.03■■□□□ 1.44
USP53-203ENST00000507597 HLA-DOAP06340 250 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms