RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 ELP3Q9H9T3 547 aa11.36□□□□□ -0.59
PFDN1-202ENST00000507185 DNM1Q05193 864 aaKnown RBP11.35□□□□□ -0.59
PFDN1-202ENST00000507185 ZNF438Q7Z4V0 828 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 TTC16Q8NEE8 873 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 WFDC12Q8WWY7 111 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 EDEM1Q92611 657 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 TP53INP1Q96A56 240 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 TET3O43151 1660 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 NOS1P29475 1434 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 FGD6Q6ZV73 1430 aa11.35□□□□□ -0.59
PFDN1-202ENST00000507185 NWD1Q149M9 1564 aa11.34□□□□□ -0.59
PFDN1-202ENST00000507185 DLL1O00548 723 aa11.34□□□□□ -0.59
PFDN1-202ENST00000507185 SMNDC1O75940 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
PFDN1-202ENST00000507185 IREB2P48200 963 aaKnown RBP11.34□□□□□ -0.59
PFDN1-202ENST00000507185 BRINP3Q76B58 766 aa11.34□□□□□ -0.59
PFDN1-202ENST00000507185 MUC3BQ9H195 1237 aa11.34□□□□□ -0.59
PFDN1-202ENST00000507185 SRA1Q9HD15 236 aaKnown RBP11.34□□□□□ -0.59
PFDN1-202ENST00000507185 TBX22Q9Y458 520 aa11.34□□□□□ -0.59
PFDN1-202ENST00000507185 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
PFDN1-202ENST00000507185 ATP11AP98196 1134 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 NCAPG2Q86XI2 1143 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 TMEM63CQ9P1W3 806 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 AMOTL2Q9Y2J4 779 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 PPME1Q9Y570 386 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 LMTK2Q8IWU2 1503 aa11.33□□□□□ -0.6
PFDN1-202ENST00000507185 COL16A1Q07092 1604 aaPredicted RBP11.32□□□□□ -0.6
PFDN1-202ENST00000507185 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
PFDN1-202ENST00000507185 H2AFB2P0C5Z0 115 aa11.32□□□□□ -0.6
PFDN1-202ENST00000507185 MPSTP25325 297 aa11.32□□□□□ -0.6
PFDN1-202ENST00000507185 EIF1AXP47813 144 aaKnown RBP11.32□□□□□ -0.6
PFDN1-202ENST00000507185 DDX17Q92841 729 aaKnown RBP11.32□□□□□ -0.6
PFDN1-202ENST00000507185 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
PFDN1-202ENST00000507185 ZFYVE9O95405 1425 aa11.32□□□□□ -0.6
PFDN1-202ENST00000507185 KIF4AO95239 1232 aa11.31□□□□□ -0.6
PFDN1-202ENST00000507185 NOS3P29474 1203 aa11.31□□□□□ -0.6
PFDN1-202ENST00000507185 C8orf34Q49A92 452 aa11.31□□□□□ -0.6
PFDN1-202ENST00000507185 ALKBH2Q6NS38 261 aa11.31□□□□□ -0.6
PFDN1-202ENST00000507185 LACRTQ9GZZ8 138 aa11.31□□□□□ -0.6
PFDN1-202ENST00000507185 RASSF4Q9H2L5 321 aa11.31□□□□□ -0.6
PFDN1-202ENST00000507185 PDGFAP04085 211 aa11.3□□□□□ -0.6
PFDN1-202ENST00000507185 MZF1P28698 734 aaPredicted RBP11.3□□□□□ -0.6
PFDN1-202ENST00000507185 MTMR3Q13615 1198 aa11.3□□□□□ -0.6
PFDN1-202ENST00000507185 AAMPQ13685 434 aa11.3□□□□□ -0.6
PFDN1-202ENST00000507185 SETDB1Q15047 1291 aa11.3□□□□□ -0.6
PFDN1-202ENST00000507185 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
PFDN1-202ENST00000507185 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
PFDN1-202ENST00000507185 Q8N3U1 123 aa11.3□□□□□ -0.6
PFDN1-202ENST00000507185 SSBP4Q9BWG4 385 aaPredicted RBP11.3□□□□□ -0.6
PFDN1-202ENST00000507185 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
PFDN1-202ENST00000507185 ANKRD50Q9ULJ7 1429 aa11.29□□□□□ -0.6
PFDN1-202ENST00000507185 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
PFDN1-202ENST00000507185 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
PFDN1-202ENST00000507185 XKR5Q6UX68 686 aa11.29□□□□□ -0.6
PFDN1-202ENST00000507185 LRRC59Q96AG4 307 aaKnown RBP11.29□□□□□ -0.6
PFDN1-202ENST00000507185 PBX4Q9BYU1 374 aa11.29□□□□□ -0.6
PFDN1-202ENST00000507185 GGNBP2Q9H3C7 697 aa11.29□□□□□ -0.6
PFDN1-202ENST00000507185 CNTN3Q9P232 1028 aa11.29□□□□□ -0.6
PFDN1-202ENST00000507185 KDM5AP29375 1690 aaKnown RBP11.29□□□□□ -0.6
PFDN1-202ENST00000507185 NCOA3Q9Y6Q9 1424 aa11.28□□□□□ -0.6
PFDN1-202ENST00000507185 CARNS1A5YM72 827 aa11.28□□□□□ -0.6
PFDN1-202ENST00000507185 CDC27P30260 824 aa11.28□□□□□ -0.6
PFDN1-202ENST00000507185 CEP120Q8N960 986 aa11.28□□□□□ -0.6
PFDN1-202ENST00000507185 AKTIPQ9H8T0 292 aa11.28□□□□□ -0.6
PFDN1-202ENST00000507185 KANSL3Q9P2N6 904 aa11.28□□□□□ -0.6
PFDN1-202ENST00000507185 RGS12O14924 1447 aa11.27□□□□□ -0.6
PFDN1-202ENST00000507185 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.6
PFDN1-202ENST00000507185 CROCC2H7BZ55 1655 aa11.27□□□□□ -0.6
PFDN1-202ENST00000507185 FAM177BA6PVY3 158 aa11.27□□□□□ -0.61
PFDN1-202ENST00000507185 LINC01387J3KSC0 135 aa11.27□□□□□ -0.61
PFDN1-202ENST00000507185 CES1P23141 567 aa11.27□□□□□ -0.61
PFDN1-202ENST00000507185 ITGAEP38570 1179 aa11.27□□□□□ -0.61
PFDN1-202ENST00000507185 XP32Q5T750 250 aa11.27□□□□□ -0.61
PFDN1-202ENST00000507185 AHDC1Q5TGY3 1603 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-202ENST00000507185 RPRD2Q5VT52 1461 aaKnown RBP11.26□□□□□ -0.61
PFDN1-202ENST00000507185 A6NHS1 94 aa11.26□□□□□ -0.61
PFDN1-202ENST00000507185 FAM13AO94988 1023 aa11.26□□□□□ -0.61
PFDN1-202ENST00000507185 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
PFDN1-202ENST00000507185 C1orf127Q8N9H9 656 aa11.26□□□□□ -0.61
PFDN1-202ENST00000507185 ASXL1Q8IXJ9 1541 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 CDC25BP30305 580 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 PHLDB3Q6NSJ2 640 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 TXNDC11Q6PKC3 985 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 PMEPA1Q969W9 287 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 MEGF10Q96KG7 1140 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 POLIQ9UNA4 740 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 PIK3R4Q99570 1358 aa11.25□□□□□ -0.61
PFDN1-202ENST00000507185 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-202ENST00000507185 ALX3O95076 343 aa11.24□□□□□ -0.61
PFDN1-202ENST00000507185 ABL1P00519 1130 aa11.24□□□□□ -0.61
PFDN1-202ENST00000507185 NPR3P17342 541 aa11.24□□□□□ -0.61
PFDN1-202ENST00000507185 PTPRAP18433 802 aa11.24□□□□□ -0.61
PFDN1-202ENST00000507185 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
PFDN1-202ENST00000507185 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
PFDN1-202ENST00000507185 POP1Q99575 1024 aaKnown RBP11.24□□□□□ -0.61
PFDN1-202ENST00000507185 SALL4Q9UJQ4 1053 aa11.24□□□□□ -0.61
PFDN1-202ENST00000507185 PTPRUQ92729 1446 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms