RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 C9orf131Q5VYM1 1079 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 DNAJC2Q99543 621 aaKnown RBP12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 VPS33BQ9H267 617 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 ANTXR1Q9H6X2 564 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 GNL3LQ9NVN8 582 aaKnown RBP12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 IQSEC3Q9UPP2 1182 aaPredicted RBP12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 FOCADQ5VW36 1801 aa12.11□□□□□ -0.47
NDUFS4-204ENST00000506974 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 GOLIM4O00461 696 aa12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 CYP2E1P05181 493 aaPredicted RBP12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 AOC3Q16853 763 aa12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 NPDC1Q9NQX5 325 aaPredicted RBP12.1□□□□□ -0.47
NDUFS4-204ENST00000506974 PRELPP51888 382 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 RILPL2Q969X0 211 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 CDHR5Q9HBB8 845 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 PIH1D3Q9NQM4 214 aaKnown RBP12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 RNF181Q9P0P0 153 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 FAM205AQ6ZU69 1335 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
NDUFS4-204ENST00000506974 PPIP5K2O43314 1243 aa12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 ECE2O60344 883 aa12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 CDC45O75419 566 aa12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 FOSBP53539 338 aa12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 RASSF7Q02833 373 aa12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 TTLL12Q14166 644 aaPredicted RBP12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 TICAM2Q86XR7 235 aa12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 DBNDD1Q9H9R9 158 aa12.08□□□□□ -0.48
NDUFS4-204ENST00000506974 LAMA4Q16363 1823 aa12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 YDJCA8MPS7 323 aa12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 CHMLP26374 656 aa12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 TTF1Q15361 905 aaPredicted RBP12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 TBC1D9Q6ZT07 1266 aa12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 FSD1Q9BTV5 496 aa12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 FAM117AQ9C073 453 aa12.07□□□□□ -0.48
NDUFS4-204ENST00000506974 GLTPD2A6NH11 291 aa12.06□□□□□ -0.48
NDUFS4-204ENST00000506974 FRAT2O75474 233 aaPredicted RBP12.06□□□□□ -0.48
NDUFS4-204ENST00000506974 CHAF1AQ13111 956 aaPredicted RBP12.06□□□□□ -0.48
NDUFS4-204ENST00000506974 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
NDUFS4-204ENST00000506974 WDR66Q8TBY9 1149 aa12.06□□□□□ -0.48
NDUFS4-204ENST00000506974 BAZ2AQ9UIF9 1905 aaKnown RBP12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 TCRBV5S4A2TA0A5A2 114 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 CHGBP05060 677 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 LARGE2Q8N3Y3 721 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 ZNF384Q8TF68 577 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 IL25Q9H293 177 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 JAG2Q9Y219 1238 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 NAV1Q8NEY1 1877 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 LAMB1P07942 1786 aa12.05□□□□□ -0.48
NDUFS4-204ENST00000506974 HIP1O00291 1037 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 PRDX5P30044 214 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 ADD2P35612 726 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 C1QTNF8P60827 252 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 FKBP1AP62942 108 aaKnown RBP12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 GTF2IP78347 998 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 GRIK5Q16478 980 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 SLFNL1Q499Z3 407 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 DACT2Q5SW24 774 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 NIM1KQ8IY84 436 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 CERS5Q8N5B7 392 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 BACH2Q9BYV9 841 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 GOPCQ9HD26 462 aa12.04□□□□□ -0.48
NDUFS4-204ENST00000506974 DDX60LQ5H9U9 1706 aaKnown RBP12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 A0A0D9SFI3 127 aa12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 IGSF3O75054 1194 aa12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 IDH1O75874 414 aaKnown RBP12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 TOMM70O94826 608 aa12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 ZFYP08048 801 aaPredicted RBP12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 PDE6AP16499 860 aa12.03□□□□□ -0.48
NDUFS4-204ENST00000506974 CLCN1P35523 988 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms