RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DHX36Q9H2U1 1008 aaKnown RBP10.23□□□□□ -0.77
PDGFC-205ENST00000506880 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
PDGFC-205ENST00000506880 RAI14Q9P0K7 980 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 APBB1O00213 710 aa10.22□□□□□ -0.77
PDGFC-205ENST00000506880 SCARF1Q14162 830 aa10.22□□□□□ -0.77
PDGFC-205ENST00000506880 APOBEC3HQ6NTF7 200 aaKnown RBP10.22□□□□□ -0.77
PDGFC-205ENST00000506880 LNPKQ9C0E8 428 aa10.22□□□□□ -0.77
PDGFC-205ENST00000506880 GINM1Q9NU53 330 aa10.22□□□□□ -0.77
PDGFC-205ENST00000506880 DAGLAQ9Y4D2 1042 aa10.22□□□□□ -0.77
PDGFC-205ENST00000506880 ATRNL1Q5VV63 1379 aa10.22□□□□□ -0.77
PDGFC-205ENST00000506880 CDK5RAP2Q96SN8 1893 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 SMARCA5O60264 1052 aaPredicted RBP10.21□□□□□ -0.77
PDGFC-205ENST00000506880 IDH1O75874 414 aaKnown RBP10.21□□□□□ -0.77
PDGFC-205ENST00000506880 ADD2P35612 726 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 RBM5P52756 815 aaKnown RBP eCLIP10.21□□□□□ -0.77
PDGFC-205ENST00000506880 KRT26Q7Z3Y9 468 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 TRPM4Q8TD43 1214 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 APPBP2Q92624 585 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 BOLA2Q9H3K6 86 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 ATP8A2Q9NTI2 1148 aa10.21□□□□□ -0.77
PDGFC-205ENST00000506880 IQSEC3Q9UPP2 1182 aaPredicted RBP10.21□□□□□ -0.77
PDGFC-205ENST00000506880 RAD50Q92878 1312 aa10.21□□□□□ -0.78
PDGFC-205ENST00000506880 PASKQ96RG2 1323 aa10.21□□□□□ -0.78
PDGFC-205ENST00000506880 PAPPA2Q9BXP8 1791 aa10.21□□□□□ -0.78
PDGFC-205ENST00000506880 GOLIM4O00461 696 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 EPB41L2O43491 1005 aaKnown RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 TBC1D12O60347 775 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 PDE6AP16499 860 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 HIRAP54198 1017 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 MAP3K11Q16584 847 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 TBC1D10BQ4KMP7 808 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 EAPPQ56P03 285 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 BMP2KLQ5H9B9 411 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 SLC9C2Q5TAH2 1124 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 SAMD7Q7Z3H4 446 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 FAM151AQ8WW52 585 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 RUFY2Q8WXA3 655 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 PRMT6Q96LA8 375 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 DNAJC2Q99543 621 aaKnown RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 CRNKL1Q9BZJ0 848 aaKnown RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 HELLSQ9NRZ9 838 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 GGA3Q9NZ52 723 aa10.2□□□□□ -0.78
PDGFC-205ENST00000506880 ZNF70Q9UC06 446 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-205ENST00000506880 MYH1P12882 1939 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 ZMYM6O95789 1325 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 TCRBV5S4A2TA0A5A2 114 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 RNF113AO15541 343 aaKnown RBP10.19□□□□□ -0.78
PDGFC-205ENST00000506880 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-205ENST00000506880 CYP7A1P22680 504 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 IRX6P78412 446 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-205ENST00000506880 MAP3K10Q02779 954 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 TTC22Q5TAA0 569 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 DCAF15Q66K64 600 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 AMOTL1Q8IY63 956 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-205ENST00000506880 DEFB129Q9H1M3 183 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 PIH1D3Q9NQM4 214 aaKnown RBP10.19□□□□□ -0.78
PDGFC-205ENST00000506880 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 LAMB1P07942 1786 aa10.19□□□□□ -0.78
PDGFC-205ENST00000506880 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 PPP1R12BO60237 982 aaPredicted RBP10.18□□□□□ -0.78
PDGFC-205ENST00000506880 PCP11498 1178 aaKnown RBP10.18□□□□□ -0.78
PDGFC-205ENST00000506880 BTDP43251 543 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 APLP1P51693 650 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 RHBDL3P58872 404 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 NBPF9Q3BBW0 867 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 ANGEL2Q5VTE6 544 aaKnown RBP10.18□□□□□ -0.78
PDGFC-205ENST00000506880 B4GALNT3Q6L9W6 998 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 CDC42EP5Q6NZY7 148 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 METTL16Q86W50 562 aaKnown RBP10.18□□□□□ -0.78
PDGFC-205ENST00000506880 MAGEB6Q8N7X4 407 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 ZNF526Q8TF50 670 aaPredicted RBP10.18□□□□□ -0.78
PDGFC-205ENST00000506880 FSD1Q9BTV5 496 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 EHD4Q9H223 541 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 ZNF287Q9HBT7 754 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 SNRKQ9NRH2 765 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
PDGFC-205ENST00000506880 HERC5Q9UII4 1024 aaKnown RBP10.18□□□□□ -0.78
PDGFC-205ENST00000506880 ZNF532Q9HCE3 1301 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 F8W031 263 aaPredicted RBP10.17□□□□□ -0.78
PDGFC-205ENST00000506880 ZMYM1Q5SVZ6 1142 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 CASC1Q6TDU7 716 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 PI16Q6UXB8 463 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 ARMC9Q7Z3E5 817 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 TTC6Q86TZ1 520 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 FOXP4Q8IVH2 680 aaPredicted RBP10.17□□□□□ -0.78
PDGFC-205ENST00000506880 ZNF384Q8TF68 577 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 AIDAQ96BJ3 306 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 RIOK1Q9BRS2 568 aaKnown RBP10.17□□□□□ -0.78
PDGFC-205ENST00000506880 MXD3Q9BW11 206 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 NACAP1Q9BZK3 213 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 USP40Q9NVE5 1235 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 PI4KBQ9UBF8 816 aa10.17□□□□□ -0.78
PDGFC-205ENST00000506880 DDX60LQ5H9U9 1706 aaKnown RBP10.16□□□□□ -0.78
PDGFC-205ENST00000506880 TMEM88BA6NKF7 163 aa10.16□□□□□ -0.78
PDGFC-205ENST00000506880 WDHD1O75717 1129 aaPredicted RBP10.16□□□□□ -0.78
PDGFC-205ENST00000506880 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms