RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 HPSEQ9Y251 543 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 UBASH3AP57075 661 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 ERCC6LQ2NKX8 1250 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
HERC6-206ENST00000506714 XAGE2Q96GT9 111 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
HERC6-206ENST00000506714 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
HERC6-206ENST00000506714 ZMYM6O95789 1325 aa17.34■□□□□ 0.37
HERC6-206ENST00000506714 TOM1O60784 492 aa17.34■□□□□ 0.37
HERC6-206ENST00000506714 WDHD1O75717 1129 aaPredicted RBP17.34■□□□□ 0.37
HERC6-206ENST00000506714 PUS3Q9BZE2 481 aaKnown RBP17.34■□□□□ 0.37
HERC6-206ENST00000506714 SERPINC1P01008 464 aa17.33■□□□□ 0.37
HERC6-206ENST00000506714 PIP4K2BP78356 416 aa17.33■□□□□ 0.37
HERC6-206ENST00000506714 OLFM4Q6UX06 510 aa17.33■□□□□ 0.37
HERC6-206ENST00000506714 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.37
HERC6-206ENST00000506714 TMX1Q9H3N1 280 aa17.33■□□□□ 0.37
HERC6-206ENST00000506714 ARGLU1Q9NWB6 273 aaPredicted RBP17.33■□□□□ 0.37
HERC6-206ENST00000506714 ZSCAN12O43309 604 aa17.33■□□□□ 0.36
HERC6-206ENST00000506714 TPM1P09493 284 aa17.33■□□□□ 0.36
HERC6-206ENST00000506714 HSD3B7Q9H2F3 369 aa17.33■□□□□ 0.36
HERC6-206ENST00000506714 BTG4Q9NY30 223 aa17.33■□□□□ 0.36
HERC6-206ENST00000506714 ANGEL1Q9UNK9 670 aaKnown RBP17.33■□□□□ 0.36
HERC6-206ENST00000506714 CCDC66A2RUB6 948 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 ELOA2Q8IYF1 753 aaPredicted RBP17.32■□□□□ 0.36
HERC6-206ENST00000506714 ALG1Q9BT22 464 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 ZNF446Q9NWS9 450 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 GPAA1O43292 621 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 IL2RBP14784 551 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 MARCKSP29966 332 aaPredicted RBP17.32■□□□□ 0.36
HERC6-206ENST00000506714 RESP18Q5W5W9 173 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 VPS37DQ86XT2 251 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 UBXN4Q92575 508 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 PUS7LQ9H0K6 701 aaKnown RBP17.32■□□□□ 0.36
HERC6-206ENST00000506714 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
HERC6-206ENST00000506714 SHANK3Q9BYB0 1731 aa17.32■□□□□ 0.36
HERC6-206ENST00000506714 CUTAO60888 179 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 ATP1A3P13637 1013 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
HERC6-206ENST00000506714 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
HERC6-206ENST00000506714 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 VSTM4Q8IW00 320 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 DNAI1Q9UI46 699 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 GOLGA6L9A6NEM1 432 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 NPHP1O15259 732 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 TOP1P11387 765 aaKnown RBP17.31■□□□□ 0.36
HERC6-206ENST00000506714 PTPAQ15257 358 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 CCDC102BQ68D86 513 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 KRT40Q6A162 431 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 SHC4Q6S5L8 630 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 ZCRB1Q8TBF4 217 aaKnown RBP17.31■□□□□ 0.36
HERC6-206ENST00000506714 HOOK1Q9UJC3 728 aaKnown RBP17.31■□□□□ 0.36
HERC6-206ENST00000506714 ECM29Q5VYK3 1845 aa17.31■□□□□ 0.36
HERC6-206ENST00000506714 PLCH1Q4KWH8 1693 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 ERVV-2B6SEH9 535 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 ADORA1P30542 326 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 ZAP70P43403 619 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 CLCN6P51797 869 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 ARHGAP29Q52LW3 1261 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 TRIM65Q6PJ69 517 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 ISCA1Q9BUE6 129 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 AKAP11Q9UKA4 1901 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 ARHGAP6O43182 974 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 A1BGP04217 495 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 TRIM29Q14134 588 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 MNS1Q8NEH6 495 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
HERC6-206ENST00000506714 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
HERC6-206ENST00000506714 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
HERC6-206ENST00000506714 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
HERC6-206ENST00000506714 ISM2Q6H9L7 571 aa17.29■□□□□ 0.36
HERC6-206ENST00000506714 RAB11FIP4Q86YS3 637 aa17.29■□□□□ 0.36
HERC6-206ENST00000506714 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
HERC6-206ENST00000506714 PLA2G12BQ9BX93 195 aa17.29■□□□□ 0.36
HERC6-206ENST00000506714 ATRNO75882 1429 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 MAP3K15Q6ZN16 1313 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 SH2B2O14492 632 aaPredicted RBP17.28■□□□□ 0.36
HERC6-206ENST00000506714 ATP8B1O43520 1251 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
HERC6-206ENST00000506714 PNOCQ13519 176 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 TTF1Q15361 905 aaPredicted RBP17.28■□□□□ 0.36
HERC6-206ENST00000506714 REXO1L1PQ8IX06 675 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 MPHOSPH8Q99549 860 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 UTP14AQ9BVJ6 771 aaKnown RBP17.28■□□□□ 0.36
HERC6-206ENST00000506714 FHOD1Q9Y613 1164 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 TCIRG1Q13488 830 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 SCARF1Q14162 830 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 DPF2Q92785 391 aa17.28■□□□□ 0.36
HERC6-206ENST00000506714 ZNF512BQ96KM6 892 aaPredicted RBP17.28■□□□□ 0.36
HERC6-206ENST00000506714 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms