RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
SNCA-210ENST00000506691 ZNF333Q96JL9 665 aa13.3□□□□□ -0.28
SNCA-210ENST00000506691 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
SNCA-210ENST00000506691 GNL3LQ9NVN8 582 aaKnown RBP13.3□□□□□ -0.28
SNCA-210ENST00000506691 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
SNCA-210ENST00000506691 FAM205AQ6ZU69 1335 aa13.3□□□□□ -0.28
SNCA-210ENST00000506691 USP2O75604 605 aaPredicted RBP13.29□□□□□ -0.28
SNCA-210ENST00000506691 HIBADHP31937 336 aaKnown RBP13.29□□□□□ -0.28
SNCA-210ENST00000506691 FXR1P51114 621 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNCA-210ENST00000506691 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
SNCA-210ENST00000506691 FBXO33Q7Z6M2 555 aa13.29□□□□□ -0.28
SNCA-210ENST00000506691 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
SNCA-210ENST00000506691 CERS5Q8N5B7 392 aa13.29□□□□□ -0.28
SNCA-210ENST00000506691 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
SNCA-210ENST00000506691 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
SNCA-210ENST00000506691 ARAP2Q8WZ64 1704 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 A0A1B0GUL7 405 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 SEMA3EO15041 775 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 GTF2A2P52657 109 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 CFAP100Q494V2 611 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 TNNI3KQ59H18 835 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 CLMNQ96JQ2 1002 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 MS4A4AQ96JQ5 239 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 PRMT6Q96LA8 375 aaPredicted RBP13.28□□□□□ -0.28
SNCA-210ENST00000506691 FPGT-TNNI3KV9GXZ4 949 aa13.28□□□□□ -0.28
SNCA-210ENST00000506691 OTOFQ9HC10 1997 aa13.27□□□□□ -0.28
SNCA-210ENST00000506691 IGSF3O75054 1194 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
SNCA-210ENST00000506691 TIMM10P62072 90 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 HDLBPQ00341 1268 aaKnown RBP13.27□□□□□ -0.29
SNCA-210ENST00000506691 PRKG1Q13976 671 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 RASA3Q14644 834 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 SPDYE2Q495Y8 402 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 CCDC158Q5M9N0 1113 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 GORABQ5T7V8 394 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 CD99L2Q8TCZ2 262 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 ZNF512BQ96KM6 892 aaPredicted RBP13.27□□□□□ -0.29
SNCA-210ENST00000506691 FAM84BQ96KN1 310 aaPredicted RBP13.27□□□□□ -0.29
SNCA-210ENST00000506691 NEUROD6Q96NK8 337 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 PTPN18Q99952 460 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 ZFYVE28Q9HCC9 887 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 PPP4R2Q9NY27 417 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 CENPFP49454 3210 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 BRCA2P51587 3418 aa13.27□□□□□ -0.29
SNCA-210ENST00000506691 IGHDP01880 384 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 UQCRFS1P1P0C7P4 283 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 KLRK1P26718 216 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 TNNI2P48788 182 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 NBPF12Q5TAG4 269 aaPredicted RBP13.26□□□□□ -0.29
SNCA-210ENST00000506691 HOOK2Q96ED9 719 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
SNCA-210ENST00000506691 GJA5P36382 358 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 SLC9C1Q4G0N8 1177 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 CENPQQ7L2Z9 268 aaPredicted RBP13.25□□□□□ -0.29
SNCA-210ENST00000506691 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNCA-210ENST00000506691 TDRD7Q8NHU6 1098 aaKnown RBP13.25□□□□□ -0.29
SNCA-210ENST00000506691 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
SNCA-210ENST00000506691 OPTNQ96CV9 577 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 DENND2AQ9ULE3 1009 aa13.25□□□□□ -0.29
SNCA-210ENST00000506691 PDS5AQ29RF7 1337 aaKnown RBP13.24□□□□□ -0.29
SNCA-210ENST00000506691 SNAP23O00161 211 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 TLR2O60603 784 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 FRAT2O75474 233 aaPredicted RBP13.24□□□□□ -0.29
SNCA-210ENST00000506691 EN2P19622 333 aaPredicted RBP13.24□□□□□ -0.29
SNCA-210ENST00000506691 BCAMP50895 628 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 NUCB1Q02818 461 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.24□□□□□ -0.29
SNCA-210ENST00000506691 AACSQ86V21 672 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNCA-210ENST00000506691 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 CSADQ9Y600 493 aa13.24□□□□□ -0.29
SNCA-210ENST00000506691 RPAP1Q9BWH6 1393 aaPredicted RBP13.23□□□□□ -0.29
SNCA-210ENST00000506691 SPDYE5A6NIY4 337 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 APBB1O00213 710 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 CETPP11597 493 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 GYG1P46976 350 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 KIF22Q14807 665 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 TAF1CQ15572 869 aaPredicted RBP13.23□□□□□ -0.29
SNCA-210ENST00000506691 ZGPATQ8N5A5 531 aaKnown RBP13.23□□□□□ -0.29
SNCA-210ENST00000506691 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 WDR66Q8TBY9 1149 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 BRI3BPQ8WY22 251 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 VEZTQ9HBM0 779 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 SUGT1Q9Y2Z0 365 aa13.23□□□□□ -0.29
SNCA-210ENST00000506691 CCL15-CCL14A0A0B4J2E2 113 aa13.22□□□□□ -0.29
SNCA-210ENST00000506691 CLRN2A0PK11 232 aa13.22□□□□□ -0.29
SNCA-210ENST00000506691 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
SNCA-210ENST00000506691 CCL15Q16663 113 aa13.22□□□□□ -0.29
SNCA-210ENST00000506691 MFSD14BQ5SR56 506 aa13.22□□□□□ -0.29
SNCA-210ENST00000506691 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
SNCA-210ENST00000506691 TMED8Q6PL24 325 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms