RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 UQCRFS1P1P0C7P4 283 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 ADORA1P30542 326 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 PHKA1P46020 1223 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 RBM5P52756 815 aaKnown RBP eCLIP8.92□□□□□ -0.98
GYPB-206ENST00000506516 TNNI3KQ59H18 835 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 SIRT2Q8IXJ6 389 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 CLASRPQ8N2M8 674 aaKnown RBP8.92□□□□□ -0.98
GYPB-206ENST00000506516 ZGPATQ8N5A5 531 aaKnown RBP8.92□□□□□ -0.98
GYPB-206ENST00000506516 CERS5Q8N5B7 392 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 KIF1BPQ96EK5 621 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 CRBNQ96SW2 442 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 MRIQ9BWK5 157 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 TTF2Q9UNY4 1162 aaKnown RBP8.92□□□□□ -0.98
GYPB-206ENST00000506516 FPGT-TNNI3KV9GXZ4 949 aa8.92□□□□□ -0.98
GYPB-206ENST00000506516 MAST3O60307 1309 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 WNT10BO00744 389 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 TBC1D12O60347 775 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
GYPB-206ENST00000506516 CFAP100Q494V2 611 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 TTC39AQ5SRH9 613 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 USP48Q86UV5 1035 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 MTMR14Q8NCE2 650 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 RHPN1Q8TCX5 695 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 PCDH10Q9P2E7 1040 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 SERPINA10Q9UK55 444 aa8.91□□□□□ -0.98
GYPB-206ENST00000506516 PASKQ96RG2 1323 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 PITPNM2Q9BZ72 1349 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 TMEM88BA6NKF7 163 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 APBB1O00213 710 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 SLC34A2O95436 690 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 LDHBP07195 334 aaKnown RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 IFIT2P09913 472 aaKnown RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 NBPF9Q3BBW0 867 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 ANGEL2Q5VTE6 544 aaKnown RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 SPTY2D1Q68D10 685 aaPredicted RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 KRT26Q7Z3Y9 468 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 PTCD2Q8WV60 388 aaKnown RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 TEKT1Q969V4 418 aa8.9□□□□□ -0.98
GYPB-206ENST00000506516 EAF2Q96CJ1 260 aaPredicted RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 GLIS2Q9BZE0 524 aaPredicted RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 CCDC8Q9H0W5 538 aaPredicted RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.9□□□□□ -0.98
GYPB-206ENST00000506516 PDS5AQ29RF7 1337 aaKnown RBP8.89□□□□□ -0.99
GYPB-206ENST00000506516 SALL1Q9NSC2 1324 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 ARID4AP29374 1257 aaPredicted RBP8.89□□□□□ -0.99
GYPB-206ENST00000506516 CRKP46108 304 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 RASGRF1Q13972 1273 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 AACSQ86V21 672 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 APOBEC3FQ8IUX4 373 aaKnown RBP8.89□□□□□ -0.99
GYPB-206ENST00000506516 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 SPATA5Q8NB90 893 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 ZNF512BQ96KM6 892 aaPredicted RBP8.89□□□□□ -0.99
GYPB-206ENST00000506516 PRMT6Q96LA8 375 aaPredicted RBP8.89□□□□□ -0.99
GYPB-206ENST00000506516 DBNDD2Q9BQY9 259 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 LRRCC1Q9C099 1032 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 BCL11AQ9H165 835 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 DCTPP1Q9H773 170 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 IL1RAPL2Q9NP60 686 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 GGA3Q9NZ52 723 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 HMG20BQ9P0W2 317 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 ABCF2Q9UG63 623 aa8.89□□□□□ -0.99
GYPB-206ENST00000506516 SCN9AQ15858 1988 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 TRAF5O00463 557 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 EVI5O60447 810 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 CELF2O95319 508 aaKnown RBP8.88□□□□□ -0.99
GYPB-206ENST00000506516 HHIPL2Q6UWX4 724 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 DZIP1Q86YF9 867 aaKnown RBP8.88□□□□□ -0.99
GYPB-206ENST00000506516 ZBED3Q96IU2 234 aaPredicted RBP8.88□□□□□ -0.99
GYPB-206ENST00000506516 ZDHHC15Q96MV8 337 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 ZNF408Q9H9D4 720 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
GYPB-206ENST00000506516 PCDHB15Q9Y5E8 787 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 A0A1B0GUL6 1792 aa8.88□□□□□ -0.99
GYPB-206ENST00000506516 ASTN2O75129 1339 aaPredicted RBP8.87□□□□□ -0.99
GYPB-206ENST00000506516 GRXCR2A6NFK2 248 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 ADM5C9JUS6 153 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 IGSF3O75054 1194 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 NF2P35240 595 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 MCAMP43121 646 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 TNNI2P48788 182 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 GSTO1P78417 241 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 TNFAIP1Q13829 316 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 GRIK5Q16478 980 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 CST9Q5W186 159 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 C2orf69Q8N8R5 385 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 EXOC6Q8TAG9 804 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 GCC1Q96CN9 775 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 RWDD1Q9H446 243 aaPredicted RBP8.87□□□□□ -0.99
GYPB-206ENST00000506516 TDRD3Q9H7E2 651 aaKnown RBP8.87□□□□□ -0.99
GYPB-206ENST00000506516 VEZTQ9HBM0 779 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 TMOD2Q9NZR1 351 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 LRP2BPQ9P2M1 347 aa8.87□□□□□ -0.99
GYPB-206ENST00000506516 ABT1Q9ULW3 272 aaKnown RBP8.87□□□□□ -0.99
GYPB-206ENST00000506516 ADAMTSL1Q8N6G6 1762 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 CLRN2A0PK11 232 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 LDHCP07864 332 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 PRDX5P30044 214 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 HTRA3P83110 453 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms