RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
TRIM23-205ENST00000506400 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
TRIM23-205ENST00000506400 TAF1DQ9H5J8 278 aaPredicted RBP13.47□□□□□ -0.25
TRIM23-205ENST00000506400 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRIM23-205ENST00000506400 RAD50Q92878 1312 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 POTECB2RU33 542 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 CHGBP05060 677 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 SLFNL1Q499Z3 407 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
TRIM23-205ENST00000506400 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.25
TRIM23-205ENST00000506400 PUS7LQ9H0K6 701 aaKnown RBP13.46□□□□□ -0.25
TRIM23-205ENST00000506400 RRAGCQ9HB90 399 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 USP40Q9NVE5 1235 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.25
TRIM23-205ENST00000506400 A0A0D9SFI3 127 aa13.45□□□□□ -0.26
TRIM23-205ENST00000506400 M0R2C6 588 aa13.45□□□□□ -0.26
TRIM23-205ENST00000506400 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
TRIM23-205ENST00000506400 MBD4O95243 580 aa13.45□□□□□ -0.26
TRIM23-205ENST00000506400 GNAT2P19087 354 aa13.45□□□□□ -0.26
TRIM23-205ENST00000506400 RHBDL3P58872 404 aa13.45□□□□□ -0.26
TRIM23-205ENST00000506400 DYNLL1P63167 89 aaKnown RBP13.45□□□□□ -0.26
TRIM23-205ENST00000506400 TRPM4Q8TD43 1214 aa13.45□□□□□ -0.26
TRIM23-205ENST00000506400 CRNKL1Q9BZJ0 848 aaKnown RBP13.45□□□□□ -0.26
TRIM23-205ENST00000506400 TDRD3Q9H7E2 651 aaKnown RBP13.45□□□□□ -0.26
TRIM23-205ENST00000506400 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
TRIM23-205ENST00000506400 GPAA1O43292 621 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 EGFRP00533 1210 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 HIRAP54198 1017 aaPredicted RBP13.44□□□□□ -0.26
TRIM23-205ENST00000506400 NBPF9Q3BBW0 867 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 CDC42EP5Q6NZY7 148 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 TEX11Q8IYF3 940 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 ZNF526Q8TF50 670 aaPredicted RBP13.44□□□□□ -0.26
TRIM23-205ENST00000506400 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
TRIM23-205ENST00000506400 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
TRIM23-205ENST00000506400 SEC62Q99442 399 aaKnown RBP13.44□□□□□ -0.26
TRIM23-205ENST00000506400 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 ARMT1Q9H993 441 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 ZNF70Q9UC06 446 aaPredicted RBP13.44□□□□□ -0.26
TRIM23-205ENST00000506400 SRCAPQ6ZRS2 3230 aa13.44□□□□□ -0.26
TRIM23-205ENST00000506400 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 SGSM2O43147 1006 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 NPM3O75607 178 aaKnown RBP13.43□□□□□ -0.26
TRIM23-205ENST00000506400 YY1P25490 414 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 TNFAIP1Q13829 316 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 FKBP1CQ5VVH2 108 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 SH3RF3Q8TEJ3 882 aaPredicted RBP13.43□□□□□ -0.26
TRIM23-205ENST00000506400 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
TRIM23-205ENST00000506400 NMRK2Q9NPI5 230 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 SCN4AP35499 1836 aa13.43□□□□□ -0.26
TRIM23-205ENST00000506400 RPAP1Q9BWH6 1393 aaPredicted RBP13.43□□□□□ -0.26
TRIM23-205ENST00000506400 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
TRIM23-205ENST00000506400 CLRN2A0PK11 232 aa13.42□□□□□ -0.26
TRIM23-205ENST00000506400 PATL2C9JE40 543 aaKnown RBP13.42□□□□□ -0.26
TRIM23-205ENST00000506400 USP5P45974 858 aa13.42□□□□□ -0.26
TRIM23-205ENST00000506400 TNNI2P48788 182 aa13.42□□□□□ -0.26
TRIM23-205ENST00000506400 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
TRIM23-205ENST00000506400 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
TRIM23-205ENST00000506400 APOBEC3FQ8IUX4 373 aaKnown RBP13.42□□□□□ -0.26
TRIM23-205ENST00000506400 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
TRIM23-205ENST00000506400 SLC4A4Q9Y6R1 1079 aa13.42□□□□□ -0.26
TRIM23-205ENST00000506400 ENTPD3O75355 529 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-205ENST00000506400 ANGEL2Q5VTE6 544 aaKnown RBP13.41□□□□□ -0.26
TRIM23-205ENST00000506400 GIMAP6Q6P9H5 292 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 ZNF589Q86UQ0 364 aaPredicted RBP13.41□□□□□ -0.26
TRIM23-205ENST00000506400 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 TGFBRAP1Q8WUH2 860 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 DCPSQ96C86 337 aaKnown RBP13.41□□□□□ -0.26
TRIM23-205ENST00000506400 NACAP1Q9BZK3 213 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 MYO5AQ9Y4I1 1855 aaKnown RBP13.41□□□□□ -0.26
TRIM23-205ENST00000506400 MYH7P12883 1935 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
TRIM23-205ENST00000506400 ADAMTSL1Q8N6G6 1762 aa13.4□□□□□ -0.26
TRIM23-205ENST00000506400 APPP05067 770 aa13.4□□□□□ -0.26
TRIM23-205ENST00000506400 LDHDQ86WU2 507 aa13.4□□□□□ -0.26
TRIM23-205ENST00000506400 DSCC1Q9BVC3 393 aa13.4□□□□□ -0.26
TRIM23-205ENST00000506400 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
TRIM23-205ENST00000506400 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
TRIM23-205ENST00000506400 MYH2Q9UKX2 1941 aa13.4□□□□□ -0.26
TRIM23-205ENST00000506400 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
TRIM23-205ENST00000506400 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
TRIM23-205ENST00000506400 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 PRKAB2O43741 272 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 REC8O95072 547 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 HSPD1P10809 573 aaKnown RBP13.39□□□□□ -0.27
TRIM23-205ENST00000506400 CACNB3P54284 484 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 PICALMQ13492 652 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 ALX1Q15699 326 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 MAPKAPK5Q8IW41 473 aa13.39□□□□□ -0.27
TRIM23-205ENST00000506400 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms