RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 SAP130Q9H0E3 1048 aa8.64□□□□□ -1.03
SMAD5-201ENST00000506223 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
SMAD5-201ENST00000506223 PDE4DIPQ5VU43 2346 aa8.64□□□□□ -1.03
SMAD5-201ENST00000506223 KDM6AO15550 1401 aaPredicted RBP8.63□□□□□ -1.03
SMAD5-201ENST00000506223 GLTPD2A6NH11 291 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 CCDC85CA6NKD9 419 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
SMAD5-201ENST00000506223 HMGB2P26583 209 aaKnown RBP8.63□□□□□ -1.03
SMAD5-201ENST00000506223 ITPK1Q13572 414 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 DALRD3Q5D0E6 543 aaKnown RBP8.63□□□□□ -1.03
SMAD5-201ENST00000506223 USHBP1Q8N6Y0 703 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 RGS22Q8NE09 1264 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 AIDAQ96BJ3 306 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 PIM2Q9P1W9 311 aa8.63□□□□□ -1.03
SMAD5-201ENST00000506223 LOC102724428A0A0B4J2F2 783 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 GFRA3O60609 400 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 DGAT1O75907 488 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 HSPA8P11142 646 aaKnown RBP8.62□□□□□ -1.03
SMAD5-201ENST00000506223 BMP1P13497 986 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 SIK1P57059 783 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 SCARF1Q14162 830 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 PKDCCQ504Y2 493 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 COX20Q5RI15 118 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 PIGBQ92521 554 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 SMARCC1Q92922 1105 aaPredicted RBP8.62□□□□□ -1.03
SMAD5-201ENST00000506223 HCN4Q9Y3Q4 1203 aa8.62□□□□□ -1.03
SMAD5-201ENST00000506223 CGNL1Q0VF96 1302 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 MAP3K19Q56UN5 1328 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
SMAD5-201ENST00000506223 DICER1Q9UPY3 1922 aaKnown RBP8.61□□□□□ -1.03
SMAD5-201ENST00000506223 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
SMAD5-201ENST00000506223 FBLN1P23142 703 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 CHRNA5P30532 468 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 HOXC9P31274 260 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 PLA2G4AP47712 749 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 VEGFBP49765 207 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 RRS1Q15050 365 aaKnown RBP8.61□□□□□ -1.03
SMAD5-201ENST00000506223 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 C4orf17Q53FE4 359 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 ALDH16A1Q8IZ83 802 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 RNF217Q8TC41 542 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 MYO19Q96H55 970 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 KIF20BQ96Q89 1820 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
SMAD5-201ENST00000506223 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
SMAD5-201ENST00000506223 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 FYB1O15117 783 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 CYP27B1O15528 508 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
SMAD5-201ENST00000506223 GYS1P13807 737 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
SMAD5-201ENST00000506223 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
SMAD5-201ENST00000506223 ECM1Q16610 540 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
SMAD5-201ENST00000506223 NLGN1Q8N2Q7 840 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 RAPGEF4Q8WZA2 1011 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 PHACTR1Q9C0D0 580 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 LRFN2Q9ULH4 789 aa8.6□□□□□ -1.03
SMAD5-201ENST00000506223 PCDH11XQ9BZA7 1347 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 PCDH11YQ9BZA8 1340 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 DLEC1Q9Y238 1755 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 TTLL8A6PVC2 850 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 TNFRSF10BO14763 440 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 FAM13AO94988 1023 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 MPSTP25325 297 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 TXLNAP40222 546 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 PHKA2P46019 1235 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 RTN1Q16799 776 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 PRICKLE2Q7Z3G6 844 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 FLT4P35916 1363 aa8.59□□□□□ -1.03
SMAD5-201ENST00000506223 AFDNP55196 1824 aaKnown RBP8.59□□□□□ -1.03
SMAD5-201ENST00000506223 AXIN1O15169 862 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 NPR3P17342 541 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 TATP17735 454 aaPredicted RBP8.58□□□□□ -1.04
SMAD5-201ENST00000506223 LMNB1P20700 586 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 TNNT2P45379 298 aaPredicted RBP8.58□□□□□ -1.04
SMAD5-201ENST00000506223 ARHGAP4P98171 946 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 POU4F2Q12837 409 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 TRAPPC3LQ5T215 181 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 NBPF10Q6P3W6 841 aaKnown RBP8.58□□□□□ -1.04
SMAD5-201ENST00000506223 LYSMD3Q7Z3D4 306 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 STIM2Q9P246 746 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 ASAP1Q9ULH1 1129 aa8.58□□□□□ -1.04
SMAD5-201ENST00000506223 PASKQ96RG2 1323 aa8.57□□□□□ -1.04
SMAD5-201ENST00000506223 DDR1Q08345 913 aa8.57□□□□□ -1.04
SMAD5-201ENST00000506223 C1orf53Q5VUE5 145 aa8.57□□□□□ -1.04
SMAD5-201ENST00000506223 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
SMAD5-201ENST00000506223 RTCBQ9Y3I0 505 aaKnown RBP8.57□□□□□ -1.04
SMAD5-201ENST00000506223 CASP8AP2Q9UKL3 1982 aa8.57□□□□□ -1.04
SMAD5-201ENST00000506223 FIGNL2A6NMB9 653 aa8.56□□□□□ -1.04
SMAD5-201ENST00000506223 DGKZQ13574 1117 aa8.56□□□□□ -1.04
SMAD5-201ENST00000506223 DNAJC14Q6Y2X3 702 aaPredicted RBP8.56□□□□□ -1.04
SMAD5-201ENST00000506223 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
SMAD5-201ENST00000506223 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
SMAD5-201ENST00000506223 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
SMAD5-201ENST00000506223 KLK14Q9P0G3 267 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms