RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ALG13Q9NP73 1137 aaKnown RBP4.56□□□□□ -1.68
TCOF1-208ENST00000506063 GGA1Q9UJY5 639 aa4.56□□□□□ -1.68
TCOF1-208ENST00000506063 DAGLAQ9Y4D2 1042 aa4.56□□□□□ -1.68
TCOF1-208ENST00000506063 FAM208BQ5VWN6 2430 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 MED23Q9ULK4 1368 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 MYH3P11055 1940 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 SPDYE2BA6NHP3 402 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 SPDYE6P0CI01 402 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 CYP2C8P10632 490 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 PBX2P40425 430 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 RPS8P62241 208 aaKnown RBP4.55□□□□□ -1.68
TCOF1-208ENST00000506063 PPIL2Q13356 520 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 SNAPC2Q13487 334 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 PDIA6Q15084 440 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 ERO1BQ86YB8 467 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 PRSS33Q8NF86 280 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 TRIB2Q92519 343 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 TIFAQ96CG3 184 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 HMX1Q9NP08 348 aaPredicted RBP4.55□□□□□ -1.68
TCOF1-208ENST00000506063 GJD2Q9UKL4 321 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 KCNH4Q9UQ05 1017 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 SPTBN2O15020 2390 aa4.55□□□□□ -1.68
TCOF1-208ENST00000506063 COL4A6Q14031 1691 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 ASPMQ8IZT6 3477 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 MED19A0JLT2 244 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 TRIM43BA6NCK2 446 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 WDHD1O75717 1129 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 MYL6BP14649 208 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 COL9A2Q14055 689 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 DLGAP5Q15398 846 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 PROSER3Q2NL68 480 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 RIC3Q7Z5B4 369 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 SH3RF1Q7Z6J0 888 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 ZKSCAN4Q969J2 545 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 ZNF428Q96B54 188 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 TRIM43Q96BQ3 446 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 RNPC3Q96LT9 517 aaKnown RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 GAS2L1Q99501 681 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 PBX4Q9BYU1 374 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 SEC31BQ9NQW1 1179 aa4.54□□□□□ -1.68
TCOF1-208ENST00000506063 RRP7AQ9Y3A4 280 aaKnown RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 ANKRD11Q6UB99 2663 aaPredicted RBP4.54□□□□□ -1.68
TCOF1-208ENST00000506063 WDR87Q6ZQQ6 2873 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 XDHP47989 1333 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 CEP250Q9BV73 2442 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.53□□□□□ -1.68
TCOF1-208ENST00000506063 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.53□□□□□ -1.68
TCOF1-208ENST00000506063 GRXCR1A8MXD5 290 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 G3V3G9 751 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 TNPO2O14787 897 aaKnown RBP4.53□□□□□ -1.68
TCOF1-208ENST00000506063 GFRA3O60609 400 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 KLRK1P26718 216 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 RTP1P59025 263 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 TCF15Q12870 199 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 SNX17Q15036 470 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 AAK1Q2M2I8 961 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 SPDYE2Q495Y8 402 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 DCAF8Q5TAQ9 597 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 RASIP1Q5U651 963 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 TTLL5Q6EMB2 1281 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 HFE2Q6ZVN8 426 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 GAS2L2Q8NHY3 880 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 PHACTR3Q96KR7 559 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 PARK7Q99497 189 aaKnown RBP4.53□□□□□ -1.68
TCOF1-208ENST00000506063 THUMPD2Q9BTF0 503 aaKnown RBP4.53□□□□□ -1.68
TCOF1-208ENST00000506063 TMEM39BQ9GZU3 492 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 PDLIM7Q9NR12 457 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 ANKIB1Q9P2G1 1089 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 TRMT112Q9UI30 125 aaKnown RBP4.53□□□□□ -1.68
TCOF1-208ENST00000506063 CSADQ9Y600 493 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 ZNF292O60281 2723 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 SMCHD1A6NHR9 2005 aa4.53□□□□□ -1.68
TCOF1-208ENST00000506063 LOC285556D6RIA3 1793 aa4.53□□□□□ -1.69
TCOF1-208ENST00000506063 COL4A4P53420 1690 aaPredicted RBP4.52□□□□□ -1.69
TCOF1-208ENST00000506063 POTEB3A0JP26 581 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 PRKAR2AP13861 404 aaKnown RBP4.52□□□□□ -1.69
TCOF1-208ENST00000506063 IGFBP4P22692 258 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 ATP2B4P23634 1241 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 CCND3P30281 292 aaPredicted RBP4.52□□□□□ -1.69
TCOF1-208ENST00000506063 ATN1P54259 1190 aaPredicted RBP4.52□□□□□ -1.69
TCOF1-208ENST00000506063 PPATQ06203 517 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 NEUROD1Q13562 356 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 CFAP100Q494V2 611 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 IER5LQ5T953 404 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 POTEBQ6S5H4 581 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 MCM10Q7L590 875 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 FAM89AQ96GI7 184 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 CNTNAP3BQ96NU0 1288 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 UIMC1Q96RL1 719 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 CNTNAP3Q9BZ76 1288 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 SENP6Q9GZR1 1112 aaPredicted RBP4.52□□□□□ -1.69
TCOF1-208ENST00000506063 COA1Q9GZY4 146 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 VEZTQ9HBM0 779 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 MIS18AQ9NYP9 233 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 ATRNL1Q5VV63 1379 aa4.52□□□□□ -1.69
TCOF1-208ENST00000506063 EP300Q09472 2414 aaPredicted RBP4.51□□□□□ -1.69
TCOF1-208ENST00000506063 ANXA1P04083 346 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 HOXB3P14651 431 aaPredicted RBP4.51□□□□□ -1.69
TCOF1-208ENST00000506063 POU3F3P20264 500 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms