RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 FBXL6Q8N531 539 aa9.39□□□□□ -0.91
CHD1-204ENST00000505982 SMG8Q8ND04 991 aaKnown RBP9.39□□□□□ -0.91
CHD1-204ENST00000505982 EPS8L3Q8TE67 593 aaKnown RBP9.39□□□□□ -0.91
CHD1-204ENST00000505982 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
CHD1-204ENST00000505982 RNF34Q969K3 372 aa9.39□□□□□ -0.91
CHD1-204ENST00000505982 CRELD1Q96HD1 420 aa9.39□□□□□ -0.91
CHD1-204ENST00000505982 NPHS2Q9NP85 383 aa9.39□□□□□ -0.91
CHD1-204ENST00000505982 SOX1O00570 391 aaPredicted RBP9.38□□□□□ -0.91
CHD1-204ENST00000505982 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
CHD1-204ENST00000505982 F13BP05160 661 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 POLR3DP05423 398 aaPredicted RBP9.38□□□□□ -0.91
CHD1-204ENST00000505982 FOSL1P15407 271 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 ZNF76P36508 570 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 FZD5Q13467 585 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 IKBKEQ14164 716 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 LDLRAD1Q5T700 205 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 ABI1Q8IZP0 508 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 HHIPQ96QV1 700 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
CHD1-204ENST00000505982 METTL5Q9NRN9 209 aaKnown RBP9.38□□□□□ -0.91
CHD1-204ENST00000505982 EREGO14944 169 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 NFKBIBQ15653 356 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 HGSNATQ68CP4 663 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 NT5DC4Q86YG4 428 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 NXPE3Q969Y0 559 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 C8orf37Q96NL8 207 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 OSMRQ99650 979 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 METTL22Q9BUU2 404 aaPredicted RBP9.37□□□□□ -0.91
CHD1-204ENST00000505982 C12orf49Q9H741 205 aa9.37□□□□□ -0.91
CHD1-204ENST00000505982 FAM95CA0A1B0GW59 222 aa9.36□□□□□ -0.91
CHD1-204ENST00000505982 GIPC1O14908 333 aa9.36□□□□□ -0.91
CHD1-204ENST00000505982 USP11P51784 963 aa9.36□□□□□ -0.91
CHD1-204ENST00000505982 FANCCQ00597 558 aa9.36□□□□□ -0.91
CHD1-204ENST00000505982 PAOXQ6QHF9 649 aa9.36□□□□□ -0.91
CHD1-204ENST00000505982 USP26Q9BXU7 913 aa9.36□□□□□ -0.91
CHD1-204ENST00000505982 ARID1BQ8NFD5 2236 aaPredicted RBP9.35□□□□□ -0.91
CHD1-204ENST00000505982 TIAF1O95411 115 aa9.35□□□□□ -0.91
CHD1-204ENST00000505982 MSMPQ1L6U9 139 aa9.35□□□□□ -0.91
CHD1-204ENST00000505982 NAALADL2Q58DX5 795 aa9.35□□□□□ -0.91
CHD1-204ENST00000505982 EXOSC6Q5RKV6 272 aaKnown RBP9.35□□□□□ -0.91
CHD1-204ENST00000505982 VN1R5Q7Z5H4 357 aa9.35□□□□□ -0.91
CHD1-204ENST00000505982 FBXL18Q96ME1 805 aa9.35□□□□□ -0.91
CHD1-204ENST00000505982 CHRDQ9H2X0 955 aa9.35□□□□□ -0.91
CHD1-204ENST00000505982 SOX17Q9H6I2 414 aaPredicted RBP9.35□□□□□ -0.91
CHD1-204ENST00000505982 CCDC39Q9UFE4 941 aa9.35□□□□□ -0.91
CHD1-204ENST00000505982 LOC100289279A0A1B0GTE1 492 aa9.34□□□□□ -0.91
CHD1-204ENST00000505982 CTSHP09668 335 aa9.34□□□□□ -0.91
CHD1-204ENST00000505982 OSBPL7Q9BZF2 842 aa9.34□□□□□ -0.91
CHD1-204ENST00000505982 FAM8A1Q9UBU6 413 aa9.34□□□□□ -0.91
CHD1-204ENST00000505982 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
CHD1-204ENST00000505982 PRNPP04156 253 aa9.33□□□□□ -0.92
CHD1-204ENST00000505982 EDN3P14138 238 aa9.33□□□□□ -0.92
CHD1-204ENST00000505982 GALNT12Q8IXK2 581 aa9.33□□□□□ -0.92
CHD1-204ENST00000505982 ZKSCAN3Q9BRR0 538 aa9.33□□□□□ -0.92
CHD1-204ENST00000505982 YIPF2Q9BWQ6 316 aa9.33□□□□□ -0.92
CHD1-204ENST00000505982 CCSER2Q9H7U1 834 aa9.33□□□□□ -0.92
CHD1-204ENST00000505982 CYP26A1O43174 497 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 USP17L7P0C7H9 530 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 NXPE4Q6UWF7 544 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 VSIG10LQ86VR7 867 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 METTL16Q86W50 562 aaKnown RBP9.32□□□□□ -0.92
CHD1-204ENST00000505982 TP53INP2Q8IXH6 220 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 ASAP3Q8TDY4 903 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 FBLIM1Q8WUP2 373 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 SREK1Q8WXA9 508 aaKnown RBP9.32□□□□□ -0.92
CHD1-204ENST00000505982 BCO2Q9BYV7 579 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 SRCIN1Q9C0H9 1055 aa9.32□□□□□ -0.92
CHD1-204ENST00000505982 DRD2P14416 443 aa9.31□□□□□ -0.92
CHD1-204ENST00000505982 EHD4Q9H223 541 aa9.31□□□□□ -0.92
CHD1-204ENST00000505982 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
CHD1-204ENST00000505982 CDPF1Q6NVV7 123 aa9.3□□□□□ -0.92
CHD1-204ENST00000505982 ASIC4Q96FT7 647 aa9.3□□□□□ -0.92
CHD1-204ENST00000505982 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
CHD1-204ENST00000505982 TGIF2Q9GZN2 237 aa9.3□□□□□ -0.92
CHD1-204ENST00000505982 BSDC1Q9NW68 430 aaPredicted RBP9.3□□□□□ -0.92
CHD1-204ENST00000505982 PPP1R1BQ9UD71 204 aaPredicted RBP9.3□□□□□ -0.92
CHD1-204ENST00000505982 DLGAP3O95886 979 aa9.29□□□□□ -0.92
CHD1-204ENST00000505982 ESRRAP11474 423 aaPredicted RBP9.29□□□□□ -0.92
CHD1-204ENST00000505982 GSTM4Q03013 218 aa9.29□□□□□ -0.92
CHD1-204ENST00000505982 SOX4Q06945 474 aaPredicted RBP9.29□□□□□ -0.92
CHD1-204ENST00000505982 RAD51AP2Q09MP3 1159 aa9.29□□□□□ -0.92
CHD1-204ENST00000505982 TAF1CQ15572 869 aaPredicted RBP9.29□□□□□ -0.92
CHD1-204ENST00000505982 MEI1Q5TIA1 1274 aa9.29□□□□□ -0.92
CHD1-204ENST00000505982 CBLL1Q75N03 491 aa9.29□□□□□ -0.92
CHD1-204ENST00000505982 HS2ST1Q7LGA3 356 aa9.29□□□□□ -0.92
CHD1-204ENST00000505982 DRC1Q96MC2 740 aa9.29□□□□□ -0.92
CHD1-204ENST00000505982 BHLHE41Q9C0J9 482 aaPredicted RBP9.29□□□□□ -0.92
CHD1-204ENST00000505982 GRM2Q14416 872 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 SF3A1Q15459 793 aaKnown RBP9.28□□□□□ -0.92
CHD1-204ENST00000505982 OGFOD2Q6N063 350 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 ZAR1Q86SH2 424 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 SHISA5Q8N114 240 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 C2CD4AQ8NCU7 369 aaPredicted RBP9.28□□□□□ -0.92
CHD1-204ENST00000505982 EZH1Q92800 747 aaPredicted RBP9.28□□□□□ -0.92
CHD1-204ENST00000505982 CAPN10Q9HC96 672 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 LATS2Q9NRM7 1088 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 PRKAG2Q9UGJ0 569 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 TRAK1Q9UPV9 953 aa9.28□□□□□ -0.92
CHD1-204ENST00000505982 GSTT1P30711 240 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms