RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 PHKA1P46020 1223 aa30.66■■■□□ 2.5
HERC4-212ENST00000505760 CD99L2Q8TCZ2 262 aa30.66■■■□□ 2.5
HERC4-212ENST00000505760 SNCAIPQ9Y6H5 919 aa30.66■■■□□ 2.5
HERC4-212ENST00000505760 SPDYE5A6NIY4 337 aa30.65■■■□□ 2.5
HERC4-212ENST00000505760 SP3Q02447 781 aa30.65■■■□□ 2.5
HERC4-212ENST00000505760 ZKSCAN4Q969J2 545 aaPredicted RBP30.65■■■□□ 2.5
HERC4-212ENST00000505760 IPO8O15397 1037 aaKnown RBP30.64■■■□□ 2.5
HERC4-212ENST00000505760 SRGAP3O43295 1099 aa30.64■■■□□ 2.5
HERC4-212ENST00000505760 CDC42EP5Q6NZY7 148 aa30.64■■■□□ 2.5
HERC4-212ENST00000505760 ERO1BQ86YB8 467 aa30.64■■■□□ 2.5
HERC4-212ENST00000505760 FAM151AQ8WW52 585 aa30.64■■■□□ 2.5
HERC4-212ENST00000505760 SALL1Q9NSC2 1324 aa30.64■■■□□ 2.5
HERC4-212ENST00000505760 ADORA1P30542 326 aa30.63■■■□□ 2.49
HERC4-212ENST00000505760 TCP10Q12799 353 aa30.63■■■□□ 2.49
HERC4-212ENST00000505760 TAF1CQ15572 869 aaPredicted RBP30.63■■■□□ 2.49
HERC4-212ENST00000505760 MIGA2Q7L4E1 593 aa30.63■■■□□ 2.49
HERC4-212ENST00000505760 ZNF341Q9BYN7 854 aa30.63■■■□□ 2.49
HERC4-212ENST00000505760 CENPFP49454 3210 aa30.62■■■□□ 2.49
HERC4-212ENST00000505760 CCDC102BQ68D86 513 aa30.62■■■□□ 2.49
HERC4-212ENST00000505760 ZGPATQ8N5A5 531 aaKnown RBP30.62■■■□□ 2.49
HERC4-212ENST00000505760 EFCC1Q9HA90 598 aa30.62■■■□□ 2.49
HERC4-212ENST00000505760 ZFYVE28Q9HCC9 887 aa30.62■■■□□ 2.49
HERC4-212ENST00000505760 WDHD1O75717 1129 aaPredicted RBP30.61■■■□□ 2.49
HERC4-212ENST00000505760 CETPP11597 493 aa30.61■■■□□ 2.49
HERC4-212ENST00000505760 USP40Q9NVE5 1235 aa30.61■■■□□ 2.49
HERC4-212ENST00000505760 MYH2Q9UKX2 1941 aa30.61■■■□□ 2.49
HERC4-212ENST00000505760 TIMM10P62072 90 aa30.6■■■□□ 2.49
HERC4-212ENST00000505760 FAM43AQ8N2R8 423 aa30.6■■■□□ 2.49
HERC4-212ENST00000505760 FRAT1Q92837 279 aaPredicted RBP30.6■■■□□ 2.49
HERC4-212ENST00000505760 AKAP2Q9Y2D5 859 aa30.6■■■□□ 2.49
HERC4-212ENST00000505760 IRF6O14896 467 aa30.59■■■□□ 2.49
HERC4-212ENST00000505760 TRIM27P14373 513 aa30.59■■■□□ 2.49
HERC4-212ENST00000505760 NFIAQ12857 509 aa30.59■■■□□ 2.49
HERC4-212ENST00000505760 PPIL2Q13356 520 aa30.59■■■□□ 2.49
HERC4-212ENST00000505760 SNAPC2Q13487 334 aa30.59■■■□□ 2.49
HERC4-212ENST00000505760 PTPN22Q9Y2R2 807 aa30.59■■■□□ 2.49
HERC4-212ENST00000505760 MTX1Q13505 466 aa30.58■■■□□ 2.49
HERC4-212ENST00000505760 A0A1B0GUL7 405 aa30.57■■■□□ 2.48
HERC4-212ENST00000505760 ZBTB22O15209 634 aa30.57■■■□□ 2.48
HERC4-212ENST00000505760 INPP5BP32019 993 aa30.57■■■□□ 2.48
HERC4-212ENST00000505760 TFCP2Q12800 502 aa30.57■■■□□ 2.48
HERC4-212ENST00000505760 RASGRF1Q13972 1273 aa30.57■■■□□ 2.48
HERC4-212ENST00000505760 ATF7IPQ6VMQ6 1270 aa30.57■■■□□ 2.48
HERC4-212ENST00000505760 BCAR3O75815 825 aa30.56■■■□□ 2.48
HERC4-212ENST00000505760 PPATQ06203 517 aa30.56■■■□□ 2.48
HERC4-212ENST00000505760 ARHGEF6Q15052 776 aa30.56■■■□□ 2.48
HERC4-212ENST00000505760 DZIP1Q86YF9 867 aaKnown RBP30.56■■■□□ 2.48
HERC4-212ENST00000505760 XAGE2Q96GT9 111 aa30.56■■■□□ 2.48
HERC4-212ENST00000505760 FAM198AQ9UFP1 575 aa30.56■■■□□ 2.48
HERC4-212ENST00000505760 ABCF2Q9UG63 623 aa30.56■■■□□ 2.48
HERC4-212ENST00000505760 GNAI2P04899 355 aa30.55■■■□□ 2.48
HERC4-212ENST00000505760 MVPQ14764 893 aaKnown RBP30.55■■■□□ 2.48
HERC4-212ENST00000505760 ZCCHC17Q9NP64 241 aaKnown RBP30.55■■■□□ 2.48
HERC4-212ENST00000505760 PDS5AQ29RF7 1337 aaKnown RBP30.54■■■□□ 2.48
HERC4-212ENST00000505760 BTBD19C9JJ37 291 aa30.54■■■□□ 2.48
HERC4-212ENST00000505760 SPTY2D1Q68D10 685 aaPredicted RBP30.54■■■□□ 2.48
HERC4-212ENST00000505760 SLF2Q8IX21 1173 aa30.54■■■□□ 2.48
HERC4-212ENST00000505760 CLUAP1Q96AJ1 413 aa30.54■■■□□ 2.48
HERC4-212ENST00000505760 NEUROD6Q96NK8 337 aa30.54■■■□□ 2.48
HERC4-212ENST00000505760 ZNF112Q9UJU3 913 aa30.54■■■□□ 2.48
HERC4-212ENST00000505760 TNNQ9UQP3 1299 aa30.53■■■□□ 2.48
HERC4-212ENST00000505760 CAP1Q01518 475 aa30.52■■■□□ 2.48
HERC4-212ENST00000505760 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.52■■■□□ 2.48
HERC4-212ENST00000505760 GAKO14976 1311 aa30.51■■■□□ 2.48
HERC4-212ENST00000505760 TLR2O60603 784 aa30.51■■■□□ 2.47
HERC4-212ENST00000505760 RGS3P49796 1198 aa30.51■■■□□ 2.47
HERC4-212ENST00000505760 GORABQ5T7V8 394 aa30.51■■■□□ 2.47
HERC4-212ENST00000505760 ZFPM1Q8IX07 1006 aa30.51■■■□□ 2.47
HERC4-212ENST00000505760 DOCK2Q92608 1830 aa30.51■■■□□ 2.47
HERC4-212ENST00000505760 IDI2Q9BXS1 227 aa30.5■■■□□ 2.47
HERC4-212ENST00000505760 ENTPD3O75355 529 aa30.49■■■□□ 2.47
HERC4-212ENST00000505760 G3BP1Q13283 466 aaKnown RBP eCLIP30.49■■■□□ 2.47
HERC4-212ENST00000505760 KIF22Q14807 665 aa30.48■■■□□ 2.47
HERC4-212ENST00000505760 NOL9Q5SY16 702 aaKnown RBP30.48■■■□□ 2.47
HERC4-212ENST00000505760 ERICH6Q7L0X2 663 aa30.48■■■□□ 2.47
HERC4-212ENST00000505760 ZSCAN29Q8IWY8 852 aaPredicted RBP30.48■■■□□ 2.47
HERC4-212ENST00000505760 ARMC5Q96C12 935 aa30.48■■■□□ 2.47
HERC4-212ENST00000505760 FAM163AQ96GL9 167 aaPredicted RBP30.48■■■□□ 2.47
HERC4-212ENST00000505760 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.48■■■□□ 2.47
HERC4-212ENST00000505760 KIAA0100Q14667 2235 aaKnown RBP30.48■■■□□ 2.47
HERC4-212ENST00000505760 PNMA6EA0A0J9YXQ4 647 aa30.47■■■□□ 2.47
HERC4-212ENST00000505760 BTDP43251 543 aa30.47■■■□□ 2.47
HERC4-212ENST00000505760 ZKSCAN2Q63HK3 967 aa30.47■■■□□ 2.47
HERC4-212ENST00000505760 KCNH4Q9UQ05 1017 aa30.47■■■□□ 2.47
HERC4-212ENST00000505760 POTEFA5A3E0 1075 aa30.46■■■□□ 2.47
HERC4-212ENST00000505760 PRPF38BQ5VTL8 546 aaKnown RBP30.46■■■□□ 2.47
HERC4-212ENST00000505760 TMEM57Q8N5G2 664 aa30.46■■■□□ 2.47
HERC4-212ENST00000505760 RBBP6Q7Z6E9 1792 aaKnown RBP30.46■■■□□ 2.47
HERC4-212ENST00000505760 MROH7-TTC4A0A0A0MT08 1334 aa30.46■■■□□ 2.47
HERC4-212ENST00000505760 MECOMQ03112 1051 aa30.45■■■□□ 2.47
HERC4-212ENST00000505760 PICALMQ13492 652 aa30.45■■■□□ 2.47
HERC4-212ENST00000505760 ANKRD23Q86SG2 305 aa30.45■■■□□ 2.47
HERC4-212ENST00000505760 SPATA5Q8NB90 893 aa30.45■■■□□ 2.47
HERC4-212ENST00000505760 HMG20BQ9P0W2 317 aa30.45■■■□□ 2.47
HERC4-212ENST00000505760 PTCH2Q9Y6C5 1203 aa30.45■■■□□ 2.47
HERC4-212ENST00000505760 MKI67P46013 3256 aaKnown RBP30.45■■■□□ 2.46
HERC4-212ENST00000505760 BRCA2P51587 3418 aa30.44■■■□□ 2.46
HERC4-212ENST00000505760 RFX7Q2KHR2 1363 aa30.44■■■□□ 2.46
HERC4-212ENST00000505760 ATRNL1Q5VV63 1379 aa30.44■■■□□ 2.46
HERC4-212ENST00000505760 LACTBP83111 547 aaPredicted RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms