RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 CYP11A1P05108 521 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 PPP2R3AQ06190 1150 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 AP3B2Q13367 1082 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 LDLRAD1Q5T700 205 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 MPRIPQ6WCQ1 1025 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 ZNF428Q96B54 188 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 WDR89Q96FK6 387 aaPredicted RBP6.76□□□□□ -1.33
CHD1-203ENST00000505657 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 UBL7Q96S82 380 aaPredicted RBP6.76□□□□□ -1.33
CHD1-203ENST00000505657 CORO1BQ9BR76 489 aa6.76□□□□□ -1.33
CHD1-203ENST00000505657 CCDC86Q9H6F5 360 aaKnown RBP6.76□□□□□ -1.33
CHD1-203ENST00000505657 MED26O95402 600 aa6.75□□□□□ -1.33
CHD1-203ENST00000505657 GSTP1P09211 210 aaKnown RBP6.75□□□□□ -1.33
CHD1-203ENST00000505657 GLB1P16278 677 aa6.75□□□□□ -1.33
CHD1-203ENST00000505657 YBX3P16989 372 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD1-203ENST00000505657 BMP6P22004 513 aa6.75□□□□□ -1.33
CHD1-203ENST00000505657 NME2P22392 152 aa6.75□□□□□ -1.33
CHD1-203ENST00000505657 DZIP1LQ8IYY4 767 aaKnown RBP6.75□□□□□ -1.33
CHD1-203ENST00000505657 GRIN3AQ8TCU5 1115 aa6.75□□□□□ -1.33
CHD1-203ENST00000505657 DDX54Q8TDD1 881 aaKnown RBP6.75□□□□□ -1.33
CHD1-203ENST00000505657 CEP44Q9C0F1 390 aa6.75□□□□□ -1.33
CHD1-203ENST00000505657 RNF208Q9H0X6 261 aa6.75□□□□□ -1.33
CHD1-203ENST00000505657 USP31Q70CQ4 1352 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 ZNF862O60290 1169 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 LIG1P18858 919 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 ARNTP27540 789 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 PREPP48147 710 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 CD97P48960 835 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 IRAK1P51617 712 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 ZNF252P-AS1Q0IIN9 211 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 TAF1CQ15572 869 aaPredicted RBP6.74□□□□□ -1.33
CHD1-203ENST00000505657 CCDC85BQ15834 202 aaPredicted RBP6.74□□□□□ -1.33
CHD1-203ENST00000505657 MAP3K11Q16584 847 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 PCNX4Q63HM2 1172 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 SLC51AQ86UW1 340 aa6.74□□□□□ -1.33
CHD1-203ENST00000505657 MEGF11A6BM72 1044 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 F6X3S4 739 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 DRD2P14416 443 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 TAL1P17542 331 aaPredicted RBP6.73□□□□□ -1.33
CHD1-203ENST00000505657 ST13P50502 369 aaKnown RBP6.73□□□□□ -1.33
CHD1-203ENST00000505657 PDE3AQ14432 1141 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 EXOSC6Q5RKV6 272 aaKnown RBP6.73□□□□□ -1.33
CHD1-203ENST00000505657 SV2BQ7L1I2 683 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 KCNB2Q92953 911 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 WDR18Q9BV38 432 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 CBX8Q9HC52 389 aa6.73□□□□□ -1.33
CHD1-203ENST00000505657 KIAA1522Q9P206 1035 aaPredicted RBP6.73□□□□□ -1.33
CHD1-203ENST00000505657 TIAF1O95411 115 aa6.72□□□□□ -1.33
CHD1-203ENST00000505657 RECKO95980 971 aa6.72□□□□□ -1.33
CHD1-203ENST00000505657 NUTM2GQ5VZR2 741 aa6.72□□□□□ -1.33
CHD1-203ENST00000505657 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
CHD1-203ENST00000505657 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
CHD1-203ENST00000505657 SMG8Q8ND04 991 aaKnown RBP6.72□□□□□ -1.33
CHD1-203ENST00000505657 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
CHD1-203ENST00000505657 OAS3Q9Y6K5 1087 aaKnown RBP6.72□□□□□ -1.33
CHD1-203ENST00000505657 AOC2O75106 756 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 ADH5P11766 374 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 AKAP4Q5JQC9 854 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 ANKRD34AQ69YU3 496 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 TTBK2Q6IQ55 1244 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 FDX2Q6P4F2 183 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 GPBAR1Q8TDU6 330 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 MRRFQ96E11 262 aaKnown RBP6.71□□□□□ -1.34
CHD1-203ENST00000505657 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 BACH2Q9BYV9 841 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 SUGCTQ9HAC7 445 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 PPP1R9AQ9ULJ8 1098 aa6.71□□□□□ -1.34
CHD1-203ENST00000505657 EIF4EBP3O60516 100 aaPredicted RBP6.7□□□□□ -1.34
CHD1-203ENST00000505657 LIG3P49916 1009 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 PTPN11Q06124 597 aaPredicted RBP6.7□□□□□ -1.34
CHD1-203ENST00000505657 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 LLGL2Q6P1M3 1020 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
CHD1-203ENST00000505657 C2CD4AQ8NCU7 369 aaPredicted RBP6.7□□□□□ -1.34
CHD1-203ENST00000505657 GAL3ST3Q96A11 431 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 EMILIN2Q9BXX0 1053 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 CEP41Q9BYV8 373 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 CYP4F12Q9HCS2 524 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 KRT82Q9NSB4 513 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 CACNA2D2Q9NY47 1150 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 TLR6Q9Y2C9 796 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 PCDHB5Q9Y5E4 795 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 PCDHGC5Q9Y5F6 944 aa6.7□□□□□ -1.34
CHD1-203ENST00000505657 TMPRSS2O15393 492 aa6.69□□□□□ -1.34
CHD1-203ENST00000505657 GP2P55259 537 aaKnown RBP6.69□□□□□ -1.34
CHD1-203ENST00000505657 SOX4Q06945 474 aaPredicted RBP6.69□□□□□ -1.34
CHD1-203ENST00000505657 TSNAXIP1Q2TAA8 658 aa6.69□□□□□ -1.34
CHD1-203ENST00000505657 KIF4BQ2VIQ3 1234 aa6.69□□□□□ -1.34
CHD1-203ENST00000505657 UTP4Q969X6 686 aaKnown RBP6.69□□□□□ -1.34
CHD1-203ENST00000505657 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
CHD1-203ENST00000505657 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
CHD1-203ENST00000505657 RAD18Q9NS91 495 aa6.69□□□□□ -1.34
CHD1-203ENST00000505657 AP4E1Q9UPM8 1137 aa6.69□□□□□ -1.34
CHD1-203ENST00000505657 ACTL7BQ9Y614 415 aa6.69□□□□□ -1.34
CHD1-203ENST00000505657 TGFB1P01137 390 aa6.68□□□□□ -1.34
CHD1-203ENST00000505657 TFE3P19532 575 aaPredicted RBP6.68□□□□□ -1.34
CHD1-203ENST00000505657 SEPT6Q14141 434 aa6.68□□□□□ -1.34
CHD1-203ENST00000505657 SGO2Q562F6 1265 aa6.68□□□□□ -1.34
CHD1-203ENST00000505657 AGMOQ6ZNB7 445 aa6.68□□□□□ -1.34
CHD1-203ENST00000505657 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms