RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 MYPNQ86TC9 1320 aa20.16■□□□□ 0.82
PDLIM7-213ENST00000505074 SOX1O00570 391 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-213ENST00000505074 EVI5O60447 810 aa20.14■□□□□ 0.81
PDLIM7-213ENST00000505074 U2AF1L4Q8WU68 220 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-213ENST00000505074 SUCLG2Q96I99 432 aa20.14■□□□□ 0.81
PDLIM7-213ENST00000505074 LRCH3Q96II8 777 aa20.14■□□□□ 0.81
PDLIM7-213ENST00000505074 ZNF521Q96K83 1311 aa20.13■□□□□ 0.81
PDLIM7-213ENST00000505074 HIBADHP31937 336 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-213ENST00000505074 PPATQ06203 517 aa20.13■□□□□ 0.81
PDLIM7-213ENST00000505074 ANKRD23Q86SG2 305 aa20.13■□□□□ 0.81
PDLIM7-213ENST00000505074 E9PSI1 815 aa20.12■□□□□ 0.81
PDLIM7-213ENST00000505074 PDHXO00330 501 aa20.12■□□□□ 0.81
PDLIM7-213ENST00000505074 GYG1P46976 350 aa20.12■□□□□ 0.81
PDLIM7-213ENST00000505074 DCAF15Q66K64 600 aa20.12■□□□□ 0.81
PDLIM7-213ENST00000505074 SLAIN1Q8ND83 568 aa20.12■□□□□ 0.81
PDLIM7-213ENST00000505074 TMOD2Q9NZR1 351 aa20.12■□□□□ 0.81
PDLIM7-213ENST00000505074 SGPL1O95470 568 aa20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 CAPN2P17655 700 aa20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 CACNB3P54284 484 aa20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 HDLBPQ00341 1268 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 UBE4AQ14139 1066 aa20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 STAP2Q9UGK3 403 aa20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 COL6A3P12111 3177 aa20.11■□□□□ 0.81
PDLIM7-213ENST00000505074 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 ADGRA2Q96PE1 1338 aa20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 FCGRTP55899 365 aa20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 PRKCZQ05513 592 aa20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 TEKT1Q969V4 418 aa20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 FAM84BQ96KN1 310 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 UNC93B1Q9H1C4 597 aa20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 BICC1Q9H694 974 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-213ENST00000505074 PTPRCP08575 1304 aa20.09■□□□□ 0.81
PDLIM7-213ENST00000505074 PUS3Q9BZE2 481 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-213ENST00000505074 ALPK3Q96L96 1907 aa20.08■□□□□ 0.81
PDLIM7-213ENST00000505074 TFRCP02786 760 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-213ENST00000505074 FKBP1CQ5VVH2 108 aa20.08■□□□□ 0.81
PDLIM7-213ENST00000505074 GPR153Q6NV75 609 aa20.08■□□□□ 0.81
PDLIM7-213ENST00000505074 TBC1D22AQ8WUA7 517 aa20.08■□□□□ 0.81
PDLIM7-213ENST00000505074 GRIK5Q16478 980 aa20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 KAZALD1Q96I82 304 aa20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 PARK7Q99497 189 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 KCNH4Q9UQ05 1017 aa20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 CUL9Q8IWT3 2517 aa20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-213ENST00000505074 MROH5Q6ZUA9 1318 aa20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 ADCY3O60266 1144 aa20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 FRAT2O75474 233 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 INPP5BP32019 993 aa20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 CHAF1AQ13111 956 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 METTL24Q5JXM2 366 aa20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 MIGA2Q7L4E1 593 aa20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 ZDHHC15Q96MV8 337 aa20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 GABRQQ9UN88 632 aa20.06■□□□□ 0.8
PDLIM7-213ENST00000505074 UTYO14607 1347 aa20.05■□□□□ 0.8
PDLIM7-213ENST00000505074 BCRP11274 1271 aa20.05■□□□□ 0.8
PDLIM7-213ENST00000505074 SLFN5Q08AF3 891 aa20.05■□□□□ 0.8
PDLIM7-213ENST00000505074 DEFB123Q8N688 67 aa20.05■□□□□ 0.8
PDLIM7-213ENST00000505074 MRIQ9BWK5 157 aa20.05■□□□□ 0.8
PDLIM7-213ENST00000505074 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
PDLIM7-213ENST00000505074 BMP8BP34820 402 aa20.04■□□□□ 0.8
PDLIM7-213ENST00000505074 DEFB118Q96PH6 123 aa20.04■□□□□ 0.8
PDLIM7-213ENST00000505074 IQSEC3Q9UPP2 1182 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-213ENST00000505074 MAST3O60307 1309 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 A0A0C4DFX4 3053 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 INHAP05111 366 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 MOGSQ13724 837 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 RABL6Q3YEC7 729 aaPredicted RBP20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 LRRC24Q50LG9 513 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 ANKRD44Q8N8A2 993 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 PXYLP1Q8TE99 480 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 CDCA7LQ96GN5 454 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 STXBP5LQ9Y2K9 1186 aa20.03■□□□□ 0.8
PDLIM7-213ENST00000505074 CYP2C8P10632 490 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 ELNP15502 786 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 FLT3LGP49771 235 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 CAVIN4Q5BKX8 364 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 APOBEC3HQ6NTF7 200 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 FBXO33Q7Z6M2 555 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 PAWRQ96IZ0 340 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 GDF15Q99988 308 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 ZNF112Q9UJU3 913 aa20.02■□□□□ 0.8
PDLIM7-213ENST00000505074 ALDH1L2Q3SY69 923 aa20.01■□□□□ 0.79
PDLIM7-213ENST00000505074 NECAB2Q7Z6G3 386 aa20.01■□□□□ 0.79
PDLIM7-213ENST00000505074 FAM151AQ8WW52 585 aa20.01■□□□□ 0.79
PDLIM7-213ENST00000505074 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
PDLIM7-213ENST00000505074 CXCL11O14625 94 aa20■□□□□ 0.79
PDLIM7-213ENST00000505074 IRF5Q13568 498 aa20■□□□□ 0.79
PDLIM7-213ENST00000505074 NOL9Q5SY16 702 aaKnown RBP20■□□□□ 0.79
PDLIM7-213ENST00000505074 GPAT2Q6NUI2 795 aa20■□□□□ 0.79
PDLIM7-213ENST00000505074 CRISPLD2Q9H0B8 497 aa20■□□□□ 0.79
PDLIM7-213ENST00000505074 PAK6Q9NQU5 681 aaPredicted RBP20■□□□□ 0.79
PDLIM7-213ENST00000505074 SUGT1Q9Y2Z0 365 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms