RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 Q6ZS46 218 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 AGGF1Q8N302 714 aaeCLIP7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 C8orf37Q96NL8 207 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 TMEM39AQ9NV64 488 aa7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 DDX41Q9UJV9 622 aaKnown RBP7.79□□□□□ -1.16
TRAPPC13-205ENST00000504243 LOC100289279A0A1B0GTE1 492 aa7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 RLBP1P12271 317 aa7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 GLB1P16278 677 aa7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 DZIP1LQ8IYY4 767 aaKnown RBP7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 SSBP4Q9BWG4 385 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 TPSG1Q9NRR2 321 aa7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 SAMM50Q9Y512 469 aa7.78□□□□□ -1.16
TRAPPC13-205ENST00000504243 TNNI2P48788 182 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 RACK1P63244 317 aaKnown RBP7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 FAAP100Q0VG06 881 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 EXOSC6Q5RKV6 272 aaKnown RBP7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 ANKRD34AQ69YU3 496 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 TTBK2Q6IQ55 1244 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 ERMP1Q7Z2K6 904 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 ANKRD24Q8TF21 1146 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 TP53INP1Q96A56 240 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 MEGF10Q96KG7 1140 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 CBX8Q9HC52 389 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 CYP4F12Q9HCS2 524 aa7.77□□□□□ -1.17
TRAPPC13-205ENST00000504243 MAOBP27338 520 aa7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 HNRNPUQ00839 825 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 UVSSAQ2YD98 709 aa7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 NUTM2GQ5VZR2 741 aa7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 FDX2Q6P4F2 183 aa7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 RSRP1Q9BUV0 290 aa7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 TLR6Q9Y2C9 796 aa7.76□□□□□ -1.17
TRAPPC13-205ENST00000504243 ENC1O14682 589 aa7.75□□□□□ -1.17
TRAPPC13-205ENST00000504243 SART1O43290 800 aaKnown RBP7.75□□□□□ -1.17
TRAPPC13-205ENST00000504243 LIG3P49916 1009 aa7.75□□□□□ -1.17
TRAPPC13-205ENST00000504243 FAM160A1Q05DH4 1040 aa7.75□□□□□ -1.17
TRAPPC13-205ENST00000504243 TMEM74Q96NL1 305 aa7.75□□□□□ -1.17
TRAPPC13-205ENST00000504243 SPON2Q9BUD6 331 aa7.75□□□□□ -1.17
TRAPPC13-205ENST00000504243 SUGCTQ9HAC7 445 aa7.75□□□□□ -1.17
TRAPPC13-205ENST00000504243 PAGE1O75459 146 aa7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 H2AFB1P0C5Y9 115 aa7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 H2AFB2P0C5Z0 115 aa7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 SNAP47Q5SQN1 464 aa7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 PCNX4Q63HM2 1172 aa7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 DIEXFQ68CQ4 756 aaKnown RBP7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 VPS37DQ86XT2 251 aa7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 SMG8Q8ND04 991 aaKnown RBP7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 EMILIN2Q9BXX0 1053 aa7.74□□□□□ -1.17
TRAPPC13-205ENST00000504243 NME2P22392 152 aa7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 DNAJA1P31689 397 aaKnown RBP7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 EIF4A3P38919 411 aaKnown RBP7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 PAK2Q13177 524 aa7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 KIAA0825Q8IV33 1275 aa7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 SULF2Q8IWU5 870 aa7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 SREK1Q8WXA9 508 aaKnown RBP7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 JARID2Q92833 1246 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 DRC1Q96MC2 740 aa7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 UBL7Q96S82 380 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC13-205ENST00000504243 IGSF3O75054 1194 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 DLGAP3O95886 979 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 PF4P02776 101 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 GSTP1P09211 210 aaKnown RBP7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 FURINP09958 794 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 LRRC14Q15048 493 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 RSPO4Q2I0M5 234 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 NKAPLQ5M9Q1 402 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 C12orf50Q8NA57 414 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 PHC3Q8NDX5 983 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 FAM46AQ96IP4 442 aaKnown RBP7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 TANGO6Q9C0B7 1094 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 RAD18Q9NS91 495 aa7.72□□□□□ -1.17
TRAPPC13-205ENST00000504243 DHX15O43143 795 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 ARNTP27540 789 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 CAMK2GQ13555 558 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 GOLM1Q8NBJ4 401 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 ZNF296Q8WUU4 475 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 KCNB2Q92953 911 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 UTP4Q969X6 686 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 TINF2Q9BSI4 451 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 MIR1-1HGQ9H1L0 117 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 KRT82Q9NSB4 513 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 ADAMTS1Q9UHI8 967 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 HIF3AQ9Y2N7 669 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 SYNGAP1Q96PV0 1343 aa7.71□□□□□ -1.18
TRAPPC13-205ENST00000504243 K7ELQ4 463 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 GAS2O43903 313 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 CTSBP07858 339 aa7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 TFE3P19532 575 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 ARID5AQ03989 594 aa7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 LLGL2Q6P1M3 1020 aa7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 AGMOQ6ZNB7 445 aa7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 GPRASP2Q96D09 838 aa7.7□□□□□ -1.18
TRAPPC13-205ENST00000504243 MYRFLQ96LU7 910 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms