RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 KARSQ15046 597 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-205ENST00000504178 A0A1B0GUL7 405 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC169A6NNP5 214 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC14Q49A88 953 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 PROCA1Q8NCQ7 364 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 WDR62O43379 1518 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 GAS8O95995 478 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 STRN3Q13033 797 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 BIRC3Q13489 604 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 PIK3AP1Q6ZUJ8 805 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 IQUBQ8NA54 791 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 UNC13AQ9UPW8 1703 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 MYCLP12524 364 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 PLCD1P51178 756 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 SMTNP53814 917 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 PLEKHM2Q8IWE5 1019 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 FAM169AQ9Y6X4 670 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 SBNO1A3KN83 1393 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 H0YIN7 160 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 DEXIO95424 95 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 ZYXQ15942 572 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 FBF1Q8TES7 1133 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 ZFP91Q96JP5 570 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 ODF2LQ9ULJ1 636 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 NOD1Q9Y239 953 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 PIK3C2GO75747 1445 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 SMIM23A6NLE4 172 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 KRT9P35527 623 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 ZNF569Q5MCW4 686 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 DPP8Q6V1X1 898 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 SUPT20HQ8NEM7 779 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 IFT74Q96LB3 600 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 AATFQ9NY61 560 aaKnown RBP eCLIP8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 AGTPBP1Q9UPW5 1226 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 MAPKBP1O60336 1514 aa8.07□□□□□ -1.12
SYNPO2-205ENST00000504178 DDX39AO00148 427 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 EYA2O00167 538 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 KCNA6P17658 529 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 NOLC1Q14978 699 aaKnown RBP eCLIP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 NCAPH2Q6IBW4 605 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 ZNF790Q6PG37 636 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 RNF34Q969K3 372 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 DDX21Q9NR30 783 aaKnown RBP eCLIP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 TXNDC16Q9P2K2 825 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 STK24Q9Y6E0 443 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 SLC27A2O14975 620 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 SNX16P57768 344 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 FMNL3Q8IVF7 1028 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 PHACTR3Q96KR7 559 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 TRERF1Q96PN7 1200 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC87Q9NVE4 849 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 IFNKQ9P0W0 207 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 EXOC7Q9UPT5 735 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 ZBED4O75132 1171 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 HSPA4P34932 840 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 CTDSPL2Q05D32 466 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 PDE4DQ08499 809 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 SPATA24Q86W54 205 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 NOC4LQ9BVI4 516 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 TCOF1Q13428 1488 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 PTPRKQ15262 1439 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 HAUS3Q68CZ6 603 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 KIAA1524Q8TCG1 905 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 ZNF594Q96JF6 807 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 TMEM87BQ96K49 555 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 TTC14Q96N46 770 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 SLC52A2Q9HAB3 445 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 LZTFL1Q9NQ48 299 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 COL17A1Q9UMD9 1497 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 EDC4Q6P2E9 1401 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 MAP3K19Q56UN5 1328 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 DYNC1I1O14576 645 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 CNNM4Q6P4Q7 775 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 IFT81Q8WYA0 676 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 GPHNQ9NQX3 736 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 PEG3Q9GZU2 1588 aa8.06□□□□□ -1.12
SYNPO2-205ENST00000504178 NOP56O00567 594 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 PSMC4P43686 418 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 TRPC3Q13507 836 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC25Q86WR0 208 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 SHANK2Q9UPX8 1470 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 TRAF5O00463 557 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 FAM98CQ17RN3 349 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 BRDTQ58F21 947 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 CDAN1Q8IWY9 1227 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 SRRTQ9BXP5 876 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 ARFGAP3Q9NP61 516 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 MTUS1Q9ULD2 1270 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 TAF5LO75529 589 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 TNFAIP3P21580 790 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 PPP1R2P41236 205 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 ADCY7P51828 1080 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 SLC8A3P57103 927 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 ASIC2Q16515 512 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 LARGE2Q8N3Y3 721 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 HOOK2Q96ED9 719 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms