RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 VEGFBP49765 207 aa22.22■■□□□ 1.15
PDLIM7-209ENST00000503346 SUPT20HL1Q3ZLR7 823 aa22.22■■□□□ 1.15
PDLIM7-209ENST00000503346 TEPSINQ96N21 525 aa22.22■■□□□ 1.15
PDLIM7-209ENST00000503346 ANTXR1Q9H6X2 564 aa22.22■■□□□ 1.15
PDLIM7-209ENST00000503346 NDUFB9Q9Y6M9 179 aa22.22■■□□□ 1.15
PDLIM7-209ENST00000503346 NBPF12Q5TAG4 269 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-209ENST00000503346 NAA16Q6N069 864 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-209ENST00000503346 TMEM39BQ9GZU3 492 aa22.21■■□□□ 1.15
PDLIM7-209ENST00000503346 RWDD1Q9H446 243 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-209ENST00000503346 SSC5DA1L4H1 1573 aa22.21■■□□□ 1.15
PDLIM7-209ENST00000503346 PAPPA2Q9BXP8 1791 aa22.2■■□□□ 1.14
PDLIM7-209ENST00000503346 ECE1P42892 770 aa22.2■■□□□ 1.14
PDLIM7-209ENST00000503346 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-209ENST00000503346 TTF1Q15361 905 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-209ENST00000503346 TMED8Q6PL24 325 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-209ENST00000503346 ECHDC1Q9NTX5 307 aa22.2■■□□□ 1.14
PDLIM7-209ENST00000503346 IDH1O75874 414 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 MAP4K4O95819 1239 aaPredicted RBP22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 RHBDL3P58872 404 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 NFIAQ12857 509 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 CYP4F22Q6NT55 531 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 MOB2Q70IA6 237 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 FAM151AQ8WW52 585 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 GPATCH3Q96I76 525 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 CAPNS2Q96L46 248 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 HAUS7Q99871 368 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 IDI2Q9BXS1 227 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 BOLA2Q9H3K6 86 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 WDR33Q9C0J8 1336 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 RFX7Q2KHR2 1363 aa22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 RPAP1Q9BWH6 1393 aaPredicted RBP22.19■■□□□ 1.14
PDLIM7-209ENST00000503346 MAP3K12Q12852 859 aa22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 TTLL12Q14166 644 aaPredicted RBP22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 MAP3K11Q16584 847 aa22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 RGMBQ6NW40 437 aa22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 ARMC9Q7Z3E5 817 aa22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 CDAN1Q8IWY9 1227 aa22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 SMC5Q8IY18 1101 aa22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 DNAJC2Q99543 621 aaKnown RBP22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 FAM198AQ9UFP1 575 aa22.18■■□□□ 1.14
PDLIM7-209ENST00000503346 UBE2Q2LH0YL09 131 aa22.17■■□□□ 1.14
PDLIM7-209ENST00000503346 GOLIM4O00461 696 aa22.17■■□□□ 1.14
PDLIM7-209ENST00000503346 PPP1R12BO60237 982 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-209ENST00000503346 WDHD1O75717 1129 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-209ENST00000503346 IGHDP01880 384 aa22.17■■□□□ 1.14
PDLIM7-209ENST00000503346 ANKRD45Q5TZF3 282 aa22.17■■□□□ 1.14
PDLIM7-209ENST00000503346 PAXIP1Q6ZW49 1069 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-209ENST00000503346 ENTPD3O75355 529 aa22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 PPP4CP60510 307 aa22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 PRKG1Q13976 671 aa22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 LDLRAD1Q5T700 205 aa22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 ADGRA1Q86SQ6 560 aa22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 PAG1Q9NWQ8 432 aa22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 ZBTB47Q9UFB7 747 aaPredicted RBP22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 ANGEL1Q9UNK9 670 aaKnown RBP22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 MYH2Q9UKX2 1941 aa22.16■■□□□ 1.14
PDLIM7-209ENST00000503346 MAST2Q6P0Q8 1798 aa22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 NPM3O75607 178 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 BAG3O95817 575 aa22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 CYP7A1P22680 504 aa22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 TCP10Q12799 353 aa22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 MAGEB6Q8N7X4 407 aa22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 CCDC102AQ96A19 550 aa22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 NOL10Q9BSC4 688 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-209ENST00000503346 TTC41PQ6P2S7 1318 aa22.14■■□□□ 1.14
PDLIM7-209ENST00000503346 UNCXA6NJT0 531 aa22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 PLCG2P16885 1265 aa22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 RGS3P49796 1198 aa22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 ZNF157P51786 506 aaPredicted RBP22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 OTUD7AQ8TE49 926 aaPredicted RBP22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 HOOK2Q96ED9 719 aa22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 EDC3Q96F86 508 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 FZD1Q9UP38 647 aa22.14■■□□□ 1.13
PDLIM7-209ENST00000503346 SALL3Q9BXA9 1300 aa22.13■■□□□ 1.13
PDLIM7-209ENST00000503346 FAM155AB1AL88 458 aaPredicted RBP22.13■■□□□ 1.13
PDLIM7-209ENST00000503346 USP2O75604 605 aaPredicted RBP22.13■■□□□ 1.13
PDLIM7-209ENST00000503346 ZFPM1Q8IX07 1006 aa22.13■■□□□ 1.13
PDLIM7-209ENST00000503346 DDX4Q9NQI0 724 aaKnown RBP22.13■■□□□ 1.13
PDLIM7-209ENST00000503346 AATFQ9NY61 560 aaKnown RBP eCLIP22.13■■□□□ 1.13
PDLIM7-209ENST00000503346 SLC10A3P09131 477 aa22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 MX1P20591 662 aa22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 MAP2K2P36507 400 aa22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 IREB2P48200 963 aaKnown RBP22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 GRM1Q13255 1194 aa22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 TSHZ3Q63HK5 1081 aa22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 RASAL3Q86YV0 1011 aa22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 CERS3Q8IU89 383 aa22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 SH3RF3Q8TEJ3 882 aaPredicted RBP22.12■■□□□ 1.13
PDLIM7-209ENST00000503346 ERC2O15083 957 aa22.11■■□□□ 1.13
PDLIM7-209ENST00000503346 PDE6AP16499 860 aa22.11■■□□□ 1.13
PDLIM7-209ENST00000503346 NOGQ13253 232 aa22.11■■□□□ 1.13
PDLIM7-209ENST00000503346 SLC9C2Q5TAH2 1124 aa22.11■■□□□ 1.13
PDLIM7-209ENST00000503346 TEX11Q8IYF3 940 aa22.11■■□□□ 1.13
PDLIM7-209ENST00000503346 PI4K2BQ8TCG2 481 aa22.11■■□□□ 1.13
PDLIM7-209ENST00000503346 DOCK2Q92608 1830 aa22.1■■□□□ 1.13
PDLIM7-209ENST00000503346 THSD7BQ9C0I4 1608 aa22.1■■□□□ 1.13
PDLIM7-209ENST00000503346 TCRBV5S4A2TA0A5A2 114 aa22.1■■□□□ 1.13
PDLIM7-209ENST00000503346 AOC2O75106 756 aa22.1■■□□□ 1.13
PDLIM7-209ENST00000503346 GLRX3O76003 335 aaKnown RBP22.1■■□□□ 1.13
PDLIM7-209ENST00000503346 PICALMQ13492 652 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms