RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ANKRD23Q86SG2 305 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 FAM43AQ8N2R8 423 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 CD99L2Q8TCZ2 262 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 FAM151AQ8WW52 585 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 SSH1Q8WYL5 1049 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 ZNF341Q9BYN7 854 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 KCNH4Q9UQ05 1017 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 JAG2Q9Y219 1238 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 SALL2Q9Y467 1007 aaPredicted RBP7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 SNCAIPQ9Y6H5 919 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 PTPRFP10586 1907 aa7.64□□□□□ -1.19
LSM3P4-201ENST00000502948 MKI67P46013 3256 aaKnown RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 AK9Q5TCS8 1911 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 POTEFA5A3E0 1075 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 IRF6O14896 467 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 FRAT2O75474 233 aaPredicted RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 NPM3O75607 178 aaKnown RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 MAP4K4O95819 1239 aaPredicted RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 LACTBP83111 547 aaPredicted RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 KIF22Q14807 665 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 GRIK5Q16478 980 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 C17orf99Q6UX52 265 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 ATG9AQ7Z3C6 839 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 CDAN1Q8IWY9 1227 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 FAM9BQ8IZU0 186 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 ZGPATQ8N5A5 531 aaKnown RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 ARHGAP45Q92619 1136 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 FAM163AQ96GL9 167 aaPredicted RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 WRNIP1Q96S55 665 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 TMEM106CQ9BVX2 250 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 IDI2Q9BXS1 227 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 COPRSQ9NQ92 184 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 GNL3LQ9NVN8 582 aaKnown RBP7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 DENND2AQ9ULE3 1009 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 SLC45A1Q9Y2W3 748 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 PHIPQ8WWQ0 1821 aa7.63□□□□□ -1.19
LSM3P4-201ENST00000502948 ATRNL1Q5VV63 1379 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 GAKO14976 1311 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 ADGRA2Q96PE1 1338 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 CXCL11O14625 94 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 ENTPD3O75355 529 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 IL15P40933 162 aaPredicted RBP7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 CAP1Q01518 475 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 MTX1Q13505 466 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 SLC9C1Q4G0N8 1177 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 OTUD5Q96G74 571 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 DOCK1Q14185 1865 aa7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 COL2A1P02458 1487 aaPredicted RBP7.62□□□□□ -1.19
LSM3P4-201ENST00000502948 RFX7Q2KHR2 1363 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 BTBD19C9JJ37 291 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 TBC1D12O60347 775 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 HOXD10P28358 340 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 CHAF1AQ13111 956 aaPredicted RBP7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 MOGSQ13724 837 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 CDC42EP5Q6NZY7 148 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 NKX2-3Q8TAU0 364 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 KLHDC4Q8TBB5 520 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 CNKSR2Q8WXI2 1034 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 TBC1D2Q9BYX2 928 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 API5Q9BZZ5 524 aaKnown RBP7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 IQSEC3Q9UPP2 1182 aaPredicted RBP7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 DAGLAQ9Y4D2 1042 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 PTCH2Q9Y6C5 1203 aa7.61□□□□□ -1.19
LSM3P4-201ENST00000502948 ZSWIM8A7E2V4 1837 aa7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 PHF20L1A8MW92 1017 aa7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 LDHBP07195 334 aaKnown RBP7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 UBTFL1P0CB47 393 aaPredicted RBP7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 BCRP11274 1271 aa7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 ATP2B3Q16720 1220 aa7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 HABP4Q5JVS0 413 aaKnown RBP7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 FASTKD5Q7L8L6 764 aaKnown RBP7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 ZKSCAN4Q969J2 545 aaPredicted RBP7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 FAM198AQ9UFP1 575 aa7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 SRRDQ9UH36 339 aa7.6□□□□□ -1.19
LSM3P4-201ENST00000502948 FOCADQ5VW36 1801 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 A0A0G2JLL6 359 aaPredicted RBP7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 EN2P19622 333 aaPredicted RBP7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 PRDX5P30044 214 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 CACNB3P54284 484 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 SPTY2D1Q68D10 685 aaPredicted RBP7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 PRRT2Q7Z6L0 340 aaPredicted RBP7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 SCYL3Q8IZE3 742 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 PARK7Q99497 189 aaKnown RBP7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 SMC4Q9NTJ3 1288 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 AKAP2Q9Y2D5 859 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 ATAD5Q96QE3 1844 aa7.59□□□□□ -1.19
LSM3P4-201ENST00000502948 GPR75-ASB3A0A0A6YYF3 556 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 PDHXO00330 501 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 CTNND1O60716 968 aaKnown RBP7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 GJB1P08034 283 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 GNAI3P08754 354 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 INPP5BP32019 993 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 GJA8P48165 433 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 NFIAQ12857 509 aa7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 MVPQ14764 893 aaKnown RBP7.58□□□□□ -1.2
LSM3P4-201ENST00000502948 DIXDC1Q155Q3 683 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms