RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 SPRED3Q2MJR0 410 aa4.59□□□□□ -1.67
SCLT1-203ENST00000502495 LDLRAD1Q5T700 205 aa4.59□□□□□ -1.67
SCLT1-203ENST00000502495 MEI1Q5TIA1 1274 aa4.59□□□□□ -1.67
SCLT1-203ENST00000502495 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.59□□□□□ -1.67
SCLT1-203ENST00000502495 TRIM42Q8IWZ5 723 aa4.59□□□□□ -1.67
SCLT1-203ENST00000502495 AGGF1Q8N302 714 aaeCLIP4.59□□□□□ -1.67
SCLT1-203ENST00000502495 UTP4Q969X6 686 aaKnown RBP4.59□□□□□ -1.67
SCLT1-203ENST00000502495 BHLHE41Q9C0J9 482 aaPredicted RBP4.59□□□□□ -1.67
SCLT1-203ENST00000502495 LACRTQ9GZZ8 138 aa4.59□□□□□ -1.67
SCLT1-203ENST00000502495 TTF2Q9UNY4 1162 aaKnown RBP4.59□□□□□ -1.67
SCLT1-203ENST00000502495 NCAPD3P42695 1498 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 ATAD2BQ9ULI0 1458 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 A0A096LPE4 126 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 A0A1W2PPZ6 126 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 FAM177BA6PVY3 158 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 XRCC5P13010 732 aaKnown RBP4.58□□□□□ -1.68
SCLT1-203ENST00000502495 TAF1CQ15572 869 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-203ENST00000502495 GDF6Q6KF10 455 aaPredicted RBP4.58□□□□□ -1.68
SCLT1-203ENST00000502495 CACTIN-AS1Q8N1I8 211 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 MUC3BQ9H195 1237 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 TRIM33Q9UPN9 1127 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 PTPRAP18433 802 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 ARMC10Q8N2F6 343 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 IL22RA1Q8N6P7 574 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 C3orf58Q8NDZ4 430 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 GIMAP7Q8NHV1 300 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 IGSF5Q9NSI5 407 aa4.58□□□□□ -1.68
SCLT1-203ENST00000502495 TTBK1Q5TCY1 1321 aaPredicted RBP4.57□□□□□ -1.68
SCLT1-203ENST00000502495 FBXO24O75426 580 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 ZNF76P36508 570 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 C9orf131Q5VYM1 1079 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 ADAMTSL4Q6UY14 1074 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 CLEC10AQ8IUN9 316 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 SHKBP1Q8TBC3 707 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 BSNDQ8WZ55 320 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 RNF34Q969K3 372 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 FBXL18Q96ME1 805 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 ZFYVE1Q9HBF4 777 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 USP31Q70CQ4 1352 aa4.57□□□□□ -1.68
SCLT1-203ENST00000502495 WIZO95785 1651 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 HMX2A2RU54 273 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 DBX1A6NMT0 343 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 ITGB5P18084 799 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 ITPKAP23677 461 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 CDC25BP30305 580 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 HDLBPQ00341 1268 aaKnown RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 FANCCQ00597 558 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 PTPN12Q05209 780 aaKnown RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 SETDB1Q15047 1291 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 TPTE2Q6XPS3 522 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 CBLL1Q75N03 491 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 FAM83CQ9BQN1 747 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 SH2B1Q9NRF2 756 aaPredicted RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 METTL5Q9NRN9 209 aaKnown RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 HMGXB3Q12766 1538 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 CDC27P30260 824 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 ST13P50502 369 aaKnown RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 ZNF157P51786 506 aaPredicted RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 CABP4P57796 275 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 CCDC85BQ15834 202 aaPredicted RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 FAM46AQ96IP4 442 aaKnown RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 MYRFLQ96LU7 910 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 ADAM19Q9H013 955 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 CLEC4MQ9H2X3 399 aaPredicted RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 ZNF576Q9H609 170 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 GPN3Q9UHW5 284 aaPredicted RBP4.56□□□□□ -1.68
SCLT1-203ENST00000502495 PPM1HQ9ULR3 514 aa4.56□□□□□ -1.68
SCLT1-203ENST00000502495 BAZ1BQ9UIG0 1483 aaKnown RBP4.55□□□□□ -1.68
SCLT1-203ENST00000502495 TOP2AP11388 1531 aaKnown RBP4.55□□□□□ -1.68
SCLT1-203ENST00000502495 ERCC5P28715 1186 aaPredicted RBP4.55□□□□□ -1.68
SCLT1-203ENST00000502495 HS2ST1Q7LGA3 356 aa4.55□□□□□ -1.68
SCLT1-203ENST00000502495 PIM2Q9P1W9 311 aa4.55□□□□□ -1.68
SCLT1-203ENST00000502495 GGT7Q9UJ14 662 aa4.55□□□□□ -1.68
SCLT1-203ENST00000502495 SOX13Q9UN79 622 aa4.55□□□□□ -1.68
SCLT1-203ENST00000502495 CC2D2AQ9P2K1 1620 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 EIF5BO60841 1220 aaKnown RBP4.54□□□□□ -1.68
SCLT1-203ENST00000502495 EPHA1P21709 976 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 PCDH1Q08174 1060 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 FAAP100Q0VG06 881 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 IKBKEQ14164 716 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 TXNDC11Q6PKC3 985 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 ACAD11Q709F0 780 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 VN1R5Q7Z5H4 357 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 NT5DC4Q86YG4 428 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 CEP44Q9C0F1 390 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 SEC31BQ9NQW1 1179 aa4.54□□□□□ -1.68
SCLT1-203ENST00000502495 WDR64B1ANS9 1081 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 MAP3K11Q16584 847 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 ZNF423Q2M1K9 1284 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 RPS26P11Q5JNZ5 115 aaPredicted RBP4.53□□□□□ -1.68
SCLT1-203ENST00000502495 SPOCD1Q6ZMY3 1216 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 METTL16Q86W50 562 aaKnown RBP4.53□□□□□ -1.68
SCLT1-203ENST00000502495 FAM20CQ8IXL6 584 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 SLC7A3Q8WY07 619 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 TRIM56Q9BRZ2 755 aaKnown RBP4.53□□□□□ -1.68
SCLT1-203ENST00000502495 NOC4LQ9BVI4 516 aaKnown RBP4.53□□□□□ -1.68
SCLT1-203ENST00000502495 ATG3Q9NT62 314 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 PPME1Q9Y570 386 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 F6X3S4 739 aa4.53□□□□□ -1.68
SCLT1-203ENST00000502495 H3BRJ5 948 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms