RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
LMNA-218ENST00000502357 BICC1Q9H694 974 aaKnown RBP16.02■□□□□ 0.16
LMNA-218ENST00000502357 CPA4Q9UI42 421 aa16.02■□□□□ 0.16
LMNA-218ENST00000502357 PDE8BO95263 885 aa16.01■□□□□ 0.15
LMNA-218ENST00000502357 GJA8P48165 433 aa16.01■□□□□ 0.15
LMNA-218ENST00000502357 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
LMNA-218ENST00000502357 GPAT2Q6NUI2 795 aa16.01■□□□□ 0.15
LMNA-218ENST00000502357 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.01■□□□□ 0.15
LMNA-218ENST00000502357 SRCIN1Q9C0H9 1055 aa16.01■□□□□ 0.15
LMNA-218ENST00000502357 C9orf78Q9NZ63 289 aaPredicted RBP16.01■□□□□ 0.15
LMNA-218ENST00000502357 SUGT1Q9Y2Z0 365 aa16.01■□□□□ 0.15
LMNA-218ENST00000502357 MGAMO43451 1857 aa16.01■□□□□ 0.15
LMNA-218ENST00000502357 ATRNL1Q5VV63 1379 aa16■□□□□ 0.15
LMNA-218ENST00000502357 KIF16BQ96L93 1317 aa16■□□□□ 0.15
LMNA-218ENST00000502357 BCRP11274 1271 aa16■□□□□ 0.15
LMNA-218ENST00000502357 PSMC4P43686 418 aa16■□□□□ 0.15
LMNA-218ENST00000502357 MIGA2Q7L4E1 593 aa16■□□□□ 0.15
LMNA-218ENST00000502357 KLHDC4Q8TBB5 520 aa16■□□□□ 0.15
LMNA-218ENST00000502357 PDHXO00330 501 aa15.99■□□□□ 0.15
LMNA-218ENST00000502357 GJB1P08034 283 aa15.99■□□□□ 0.15
LMNA-218ENST00000502357 GRK4P32298 578 aa15.99■□□□□ 0.15
LMNA-218ENST00000502357 RFX5P48382 616 aaPredicted RBP15.99■□□□□ 0.15
LMNA-218ENST00000502357 KIF22Q14807 665 aa15.99■□□□□ 0.15
LMNA-218ENST00000502357 NOL9Q5SY16 702 aaKnown RBP15.99■□□□□ 0.15
LMNA-218ENST00000502357 FAM151AQ8WW52 585 aa15.99■□□□□ 0.15
LMNA-218ENST00000502357 ZNF341Q9BYN7 854 aa15.99■□□□□ 0.15
LMNA-218ENST00000502357 NFIAQ12857 509 aa15.98■□□□□ 0.15
LMNA-218ENST00000502357 FAM198AQ9UFP1 575 aa15.98■□□□□ 0.15
LMNA-218ENST00000502357 LAMA3Q16787 3333 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 PHIPQ8WWQ0 1821 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 PHF20L1A8MW92 1017 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 ECM2O94769 699 aaPredicted RBP15.97■□□□□ 0.15
LMNA-218ENST00000502357 CCL5P13501 91 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 CAVIN4Q5BKX8 364 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 DCAF15Q66K64 600 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 CDC42EP5Q6NZY7 148 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 ZFPM1Q8IX07 1006 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 GABRQQ9UN88 632 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
LMNA-218ENST00000502357 DAGLAQ9Y4D2 1042 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 DOCK3Q8IZD9 2030 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 COL6A3P12111 3177 aa15.97■□□□□ 0.15
LMNA-218ENST00000502357 PTPRFP10586 1907 aa15.96■□□□□ 0.15
LMNA-218ENST00000502357 ALPK3Q96L96 1907 aa15.96■□□□□ 0.15
LMNA-218ENST00000502357 PRKCZQ05513 592 aa15.96■□□□□ 0.15
LMNA-218ENST00000502357 HOOK2Q96ED9 719 aa15.96■□□□□ 0.15
LMNA-218ENST00000502357 USP44Q9H0E7 712 aa15.96■□□□□ 0.15
LMNA-218ENST00000502357 MYH13Q9UKX3 1938 aa15.96■□□□□ 0.14
LMNA-218ENST00000502357 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
LMNA-218ENST00000502357 MAP3K10Q02779 954 aa15.95■□□□□ 0.14
LMNA-218ENST00000502357 DIXDC1Q155Q3 683 aa15.95■□□□□ 0.14
LMNA-218ENST00000502357 ATG9AQ7Z3C6 839 aa15.95■□□□□ 0.14
LMNA-218ENST00000502357 VPS37DQ86XT2 251 aa15.95■□□□□ 0.14
LMNA-218ENST00000502357 NKX2-3Q8TAU0 364 aa15.95■□□□□ 0.14
LMNA-218ENST00000502357 UNC93B1Q9H1C4 597 aa15.95■□□□□ 0.14
LMNA-218ENST00000502357 RFX7Q2KHR2 1363 aa15.95■□□□□ 0.14
LMNA-218ENST00000502357 MAST3O60307 1309 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 MYPNQ86TC9 1320 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 ZNF521Q96K83 1311 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 CXCL11O14625 94 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 WDHD1O75717 1129 aaPredicted RBP15.94■□□□□ 0.14
LMNA-218ENST00000502357 CYP2C8P10632 490 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 PRDX5P30044 214 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 SH3BP5LQ7L8J4 393 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 MRPL50Q8N5N7 158 aaKnown RBP15.94■□□□□ 0.14
LMNA-218ENST00000502357 U2AF1L4Q8WU68 220 aaKnown RBP15.94■□□□□ 0.14
LMNA-218ENST00000502357 DPF3Q92784 378 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 RNF208Q9H0X6 261 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 TMOD2Q9NZR1 351 aa15.94■□□□□ 0.14
LMNA-218ENST00000502357 SOX1O00570 391 aaPredicted RBP15.93■□□□□ 0.14
LMNA-218ENST00000502357 ZBTB22O15209 634 aa15.93■□□□□ 0.14
LMNA-218ENST00000502357 FMNL1O95466 1100 aaPredicted RBP15.93■□□□□ 0.14
LMNA-218ENST00000502357 SGPL1O95470 568 aa15.93■□□□□ 0.14
LMNA-218ENST00000502357 SLURP2P0DP57 97 aa15.93■□□□□ 0.14
LMNA-218ENST00000502357 HOXD10P28358 340 aa15.93■□□□□ 0.14
LMNA-218ENST00000502357 TCP10Q12799 353 aa15.93■□□□□ 0.14
LMNA-218ENST00000502357 PUM3Q15397 648 aaKnown RBP15.93■□□□□ 0.14
LMNA-218ENST00000502357 RAET1EQ8TD07 263 aa15.93■□□□□ 0.14
LMNA-218ENST00000502357 AK9Q5TCS8 1911 aa15.92■□□□□ 0.14
LMNA-218ENST00000502357 A0A0G2JLL6 359 aaPredicted RBP15.92■□□□□ 0.14
LMNA-218ENST00000502357 FRAT2O75474 233 aaPredicted RBP15.92■□□□□ 0.14
LMNA-218ENST00000502357 PRRT2Q7Z6L0 340 aaPredicted RBP15.92■□□□□ 0.14
LMNA-218ENST00000502357 WDR66Q8TBY9 1149 aa15.92■□□□□ 0.14
LMNA-218ENST00000502357 AFG3L2Q9Y4W6 797 aa15.92■□□□□ 0.14
LMNA-218ENST00000502357 EYA2O00167 538 aa15.91■□□□□ 0.14
LMNA-218ENST00000502357 PTPRAP18433 802 aa15.91■□□□□ 0.14
LMNA-218ENST00000502357 SLAIN1Q8ND83 568 aa15.91■□□□□ 0.14
LMNA-218ENST00000502357 IDI2Q9BXS1 227 aa15.91■□□□□ 0.14
LMNA-218ENST00000502357 DOCK2Q92608 1830 aa15.91■□□□□ 0.14
LMNA-218ENST00000502357 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
LMNA-218ENST00000502357 IFIT1P09914 478 aaKnown RBP15.9■□□□□ 0.14
LMNA-218ENST00000502357 FCGRTP55899 365 aa15.9■□□□□ 0.14
LMNA-218ENST00000502357 PXYLP1Q8TE99 480 aa15.9■□□□□ 0.14
LMNA-218ENST00000502357 LPIN2Q92539 896 aa15.9■□□□□ 0.14
LMNA-218ENST00000502357 PARK7Q99497 189 aaKnown RBP15.9■□□□□ 0.14
LMNA-218ENST00000502357 HTATIP2Q9BUP3 242 aa15.9■□□□□ 0.14
LMNA-218ENST00000502357 CRISPLD2Q9H0B8 497 aa15.9■□□□□ 0.14
LMNA-218ENST00000502357 MRS2Q9HD23 443 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms