RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 BRIP1Q9BX63 1249 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 NACAP1Q9BZK3 213 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 PODXL2Q9NZ53 605 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 NSFL1CQ9UNZ2 370 aaKnown RBP21.5■■□□□ 1.03
LINC00535-201ENST00000501400 LAMB1P07942 1786 aa21.5■■□□□ 1.03
LINC00535-201ENST00000501400 MMP10P09238 476 aa21.49■■□□□ 1.03
LINC00535-201ENST00000501400 HPS5Q9UPZ3 1129 aa21.49■■□□□ 1.03
LINC00535-201ENST00000501400 ATP2B4P23634 1241 aa21.49■■□□□ 1.03
LINC00535-201ENST00000501400 STAG1Q8WVM7 1258 aa21.49■■□□□ 1.03
LINC00535-201ENST00000501400 GDPD2Q9HCC8 539 aa21.49■■□□□ 1.03
LINC00535-201ENST00000501400 GGA1Q9UJY5 639 aa21.49■■□□□ 1.03
LINC00535-201ENST00000501400 KLF18A0A0U1RQI7 1052 aa21.48■■□□□ 1.03
LINC00535-201ENST00000501400 PTPDC1A2A3K4 754 aa21.48■■□□□ 1.03
LINC00535-201ENST00000501400 SH2B2O14492 632 aaPredicted RBP21.48■■□□□ 1.03
LINC00535-201ENST00000501400 AKNAD1Q5T1N1 836 aa21.48■■□□□ 1.03
LINC00535-201ENST00000501400 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
LINC00535-201ENST00000501400 ZNF804AQ7Z570 1209 aa21.48■■□□□ 1.03
LINC00535-201ENST00000501400 SRGNP10124 158 aa21.47■■□□□ 1.03
LINC00535-201ENST00000501400 PDIA4P13667 645 aaKnown RBP21.47■■□□□ 1.03
LINC00535-201ENST00000501400 TMEM87AQ8NBN3 555 aa21.47■■□□□ 1.03
LINC00535-201ENST00000501400 DDX11Q96FC9 970 aa21.47■■□□□ 1.03
LINC00535-201ENST00000501400 POLLQ9UGP5 575 aa21.47■■□□□ 1.03
LINC00535-201ENST00000501400 NAP1L2Q9ULW6 460 aaPredicted RBP21.47■■□□□ 1.03
LINC00535-201ENST00000501400 ANGEL1Q9UNK9 670 aaKnown RBP21.47■■□□□ 1.03
LINC00535-201ENST00000501400 CNPY2Q9Y2B0 182 aa21.47■■□□□ 1.03
LINC00535-201ENST00000501400 PPEF1O14829 653 aaPredicted RBP21.47■■□□□ 1.03
LINC00535-201ENST00000501400 TBC1D16Q8TBP0 767 aa21.47■■□□□ 1.03
LINC00535-201ENST00000501400 GOLGA8BA8MQT2 603 aa21.46■■□□□ 1.03
LINC00535-201ENST00000501400 SMIM22K7EJ46 135 aa21.46■■□□□ 1.03
LINC00535-201ENST00000501400 PPARAQ07869 468 aa21.46■■□□□ 1.03
LINC00535-201ENST00000501400 CAMKK2Q96RR4 588 aa21.46■■□□□ 1.03
LINC00535-201ENST00000501400 SENP2Q9HC62 589 aa21.46■■□□□ 1.03
LINC00535-201ENST00000501400 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
LINC00535-201ENST00000501400 GRIK5Q16478 980 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 WDR66Q8TBY9 1149 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 IGDCC4Q8TDY8 1250 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 CD209Q9NNX6 404 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 ANAPC4Q9UJX5 808 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 ATP6V1DQ9Y5K8 247 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 FSD2A1L4K1 749 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 KDM4AO75164 1064 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 TMED8Q6PL24 325 aaPredicted RBP21.45■■□□□ 1.02
LINC00535-201ENST00000501400 TMC4Q7Z404 712 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 FERMT3Q86UX7 667 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 TMEM87BQ96K49 555 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 CNNM2Q9H8M5 875 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 AATFQ9NY61 560 aaKnown RBP eCLIP21.45■■□□□ 1.02
LINC00535-201ENST00000501400 ZSWIM5Q9P217 1185 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 PARP3Q9Y6F1 533 aa21.45■■□□□ 1.02
LINC00535-201ENST00000501400 MYH15Q9Y2K3 1946 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 IL1R1P14778 569 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 HMGN5P82970 282 aaKnown RBP21.44■■□□□ 1.02
LINC00535-201ENST00000501400 DNM1Q05193 864 aaKnown RBP21.44■■□□□ 1.02
LINC00535-201ENST00000501400 EN1Q05925 392 aaPredicted RBP21.44■■□□□ 1.02
LINC00535-201ENST00000501400 MFSD6Q6ZSS7 791 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 USP48Q86UV5 1035 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 RAB11FIP4Q86YS3 637 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 SP8Q8IXZ3 490 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 LY9Q9HBG7 655 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 ATP6V0A2Q9Y487 856 aa21.44■■□□□ 1.02
LINC00535-201ENST00000501400 MYH2Q9UKX2 1941 aa21.43■■□□□ 1.02
LINC00535-201ENST00000501400 ECM29Q5VYK3 1845 aa21.43■■□□□ 1.02
LINC00535-201ENST00000501400 NPR1P16066 1061 aa21.43■■□□□ 1.02
LINC00535-201ENST00000501400 SPTY2D1Q68D10 685 aaPredicted RBP21.43■■□□□ 1.02
LINC00535-201ENST00000501400 DZIP1Q86YF9 867 aaKnown RBP21.43■■□□□ 1.02
LINC00535-201ENST00000501400 KRT23Q9C075 422 aa21.43■■□□□ 1.02
LINC00535-201ENST00000501400 GADD45BO75293 160 aaPredicted RBP21.43■■□□□ 1.02
LINC00535-201ENST00000501400 CDK5RAP2Q96SN8 1893 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 CYP2D7A0A087X1C5 515 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 PPFIA3O75145 1194 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 LDHBP07195 334 aaKnown RBP21.42■■□□□ 1.02
LINC00535-201ENST00000501400 FDPSP14324 419 aaKnown RBP21.42■■□□□ 1.02
LINC00535-201ENST00000501400 SLC15A2Q16348 729 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 CAVIN1Q6NZI2 390 aaKnown RBP21.42■■□□□ 1.02
LINC00535-201ENST00000501400 GIMAP6Q6P9H5 292 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 APOA5Q6Q788 366 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 SGMS1Q86VZ5 419 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 FAM184AQ8NB25 1140 aa21.42■■□□□ 1.02
LINC00535-201ENST00000501400 MINDY4BA8MYZ0 360 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 IGSF3O75054 1194 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 RESTQ13127 1097 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 STK11IPQ8N1F8 1099 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 FIBPO43427 364 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 PDE6BP35913 854 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 TMEM67Q5HYA8 995 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 FAM173BQ6P4H8 233 aa21.41■■□□□ 1.02
LINC00535-201ENST00000501400 RNF41Q9H4P4 317 aaPredicted RBP21.41■■□□□ 1.02
LINC00535-201ENST00000501400 DCP1AQ9NPI6 582 aaPredicted RBP21.41■■□□□ 1.02
LINC00535-201ENST00000501400 RBM27Q9P2N5 1060 aaKnown RBP21.41■■□□□ 1.02
LINC00535-201ENST00000501400 NAV1Q8NEY1 1877 aa21.4■■□□□ 1.02
LINC00535-201ENST00000501400 MBD3O95983 291 aa21.4■■□□□ 1.02
LINC00535-201ENST00000501400 NCLP19338 710 aaKnown RBP21.4■■□□□ 1.02
LINC00535-201ENST00000501400 LIFRP42702 1097 aa21.4■■□□□ 1.02
LINC00535-201ENST00000501400 EVX2Q03828 476 aa21.4■■□□□ 1.02
LINC00535-201ENST00000501400 RRP12Q5JTH9 1297 aaKnown RBP21.4■■□□□ 1.02
LINC00535-201ENST00000501400 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
LINC00535-201ENST00000501400 CRNKL1Q9BZJ0 848 aaKnown RBP21.4■■□□□ 1.02
LINC00535-201ENST00000501400 DLEC1Q9Y238 1755 aa21.4■■□□□ 1.02
LINC00535-201ENST00000501400 C6orf229H3BNL8 230 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms