RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 MYH14Q7Z406 1995 aaKnown RBP11.47□□□□□ -0.57
CLIP1-204ENST00000501271 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 MICU3Q86XE3 530 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 PHKBQ93100 1093 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 MRFAP1L1Q96HT8 127 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 LAMB2P55268 1798 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 BCORQ6W2J9 1755 aa11.47□□□□□ -0.57
CLIP1-204ENST00000501271 MROH7-TTC4A0A0A0MT08 1334 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 BECN2A8MW95 431 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 EIF5P55010 431 aaKnown RBP11.46□□□□□ -0.57
CLIP1-204ENST00000501271 AXDND1Q5T1B0 1012 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-204ENST00000501271 CEP57L1Q8IYX8 460 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 AOPEPQ8N6M6 819 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 IGDCC4Q8TDY8 1250 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 SDF4Q9BRK5 362 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 ALG1Q9BT22 464 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 LY9Q9HBG7 655 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 TACC3Q9Y6A5 838 aa11.46□□□□□ -0.57
CLIP1-204ENST00000501271 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-204ENST00000501271 COL4A1P02462 1669 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 RREB1Q92766 1687 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 ROBO1Q9Y6N7 1651 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 MBD4O95243 580 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 SLC5A1P13866 664 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 INTS5Q6P9B9 1019 aaKnown RBP11.46□□□□□ -0.58
CLIP1-204ENST00000501271 SYNE3Q6ZMZ3 975 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 MYL10Q9BUA6 226 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.58
CLIP1-204ENST00000501271 RANBP6O60518 1105 aaKnown RBP11.45□□□□□ -0.58
CLIP1-204ENST00000501271 WDHD1O75717 1129 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-204ENST00000501271 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 ARID5BQ14865 1188 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 ALX1Q15699 326 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 NTRK3Q16288 839 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 DPCR1Q3MIW9 517 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 KRT40Q6A162 431 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 IFNL3Q8IZI9 196 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 TMEM87BQ96K49 555 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 ARMT1Q9H993 441 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 FAM217BQ9NTX9 383 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-204ENST00000501271 KIAA1468Q9P260 1216 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 KDM4FA0A1W2PPD8 638 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 UBE2Q2LH0YL09 131 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 ZBTB43O43298 467 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 CDKL5O76039 1030 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 PFKFB1P16118 471 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 SGMS1Q86VZ5 419 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 AK7Q96M32 723 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 MAP7D2Q96T17 732 aa11.45□□□□□ -0.58
CLIP1-204ENST00000501271 A0A0G2JS52 829 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 PATL2C9JE40 543 aaKnown RBP11.44□□□□□ -0.58
CLIP1-204ENST00000501271 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
CLIP1-204ENST00000501271 ZNF202O95125 648 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 MARCKSP29966 332 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-204ENST00000501271 CRKLP46109 303 aaKnown RBP11.44□□□□□ -0.58
CLIP1-204ENST00000501271 MAP3K12Q12852 859 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 TMEM67Q5HYA8 995 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 NFXL1Q6ZNB6 911 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 ZNF710Q8N1W2 664 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 RGS22Q8NE09 1264 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 NAPBQ9H115 298 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 A0A1B0GUL6 1792 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 GOLGA8AA7E2F4 631 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 PRKAB2O43741 272 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 CMA1P23946 247 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 SLC39A14Q15043 492 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 LRRC8AQ8IWT6 810 aa11.44□□□□□ -0.58
CLIP1-204ENST00000501271 C16orf45Q96MC5 204 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-204ENST00000501271 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
CLIP1-204ENST00000501271 NAT10Q9H0A0 1025 aaKnown RBP11.44□□□□□ -0.58
CLIP1-204ENST00000501271 NRAPQ86VF7 1730 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 BIN1O00499 593 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 CAMTA2O94983 1202 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 BCAMP50895 628 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 CHAF1AQ13111 956 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-204ENST00000501271 LCORLQ8N3X6 602 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 ACSBG1Q96GR2 724 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 TAF1P21675 1872 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 SLC3A2P08195 630 aaKnown RBP11.43□□□□□ -0.58
CLIP1-204ENST00000501271 ATP6V1AP38606 617 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
CLIP1-204ENST00000501271 LIFRP42702 1097 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 PTPAQ15257 358 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 CPLX2Q6PUV4 134 aaKnown RBP11.43□□□□□ -0.58
CLIP1-204ENST00000501271 MAP3K14Q99558 947 aa11.43□□□□□ -0.58
CLIP1-204ENST00000501271 IFIT3O14879 490 aaKnown RBP11.42□□□□□ -0.58
CLIP1-204ENST00000501271 NTSR2O95665 410 aa11.42□□□□□ -0.58
CLIP1-204ENST00000501271 ITPK1Q13572 414 aa11.42□□□□□ -0.58
CLIP1-204ENST00000501271 AKNAD1Q5T1N1 836 aa11.42□□□□□ -0.58
CLIP1-204ENST00000501271 FILIP1Q7Z7B0 1213 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms