RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 SSBP4Q9BWG4 385 aaPredicted RBP9.02□□□□□ -0.97
CRNDE-201ENST00000501177 ACIN1Q9UKV3 1341 aaKnown RBP9.02□□□□□ -0.97
CRNDE-201ENST00000501177 CCDC144AA2RUR9 1427 aa9.01□□□□□ -0.97
CRNDE-201ENST00000501177 PCSK7Q16549 785 aa9.01□□□□□ -0.97
CRNDE-201ENST00000501177 DEFB132Q7Z7B7 95 aa9.01□□□□□ -0.97
CRNDE-201ENST00000501177 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
CRNDE-201ENST00000501177 SMG9Q9H0W8 520 aaKnown RBP9.01□□□□□ -0.97
CRNDE-201ENST00000501177 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
CRNDE-201ENST00000501177 PPLO60437 1756 aa9.01□□□□□ -0.97
CRNDE-201ENST00000501177 KNDC1Q76NI1 1749 aa9□□□□□ -0.97
CRNDE-201ENST00000501177 ABCA3Q99758 1704 aa9□□□□□ -0.97
CRNDE-201ENST00000501177 J3QW42 95 aa9□□□□□ -0.97
CRNDE-201ENST00000501177 DEAF1O75398 565 aaPredicted RBP9□□□□□ -0.97
CRNDE-201ENST00000501177 NRLP54845 237 aa9□□□□□ -0.97
CRNDE-201ENST00000501177 NRG1Q02297 640 aaPredicted RBP9□□□□□ -0.97
CRNDE-201ENST00000501177 TRIP4Q15650 581 aaPredicted RBP9□□□□□ -0.97
CRNDE-201ENST00000501177 SWI5Q1ZZU3 235 aa9□□□□□ -0.97
CRNDE-201ENST00000501177 FBXO11Q86XK2 927 aa9□□□□□ -0.97
CRNDE-201ENST00000501177 FMN2Q9NZ56 1722 aa9□□□□□ -0.97
CRNDE-201ENST00000501177 ADGRB2O60241 1585 aa8.99□□□□□ -0.97
CRNDE-201ENST00000501177 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.99□□□□□ -0.97
CRNDE-201ENST00000501177 MMP20O60882 483 aa8.99□□□□□ -0.97
CRNDE-201ENST00000501177 EIF2AK2P19525 551 aaKnown RBP8.99□□□□□ -0.97
CRNDE-201ENST00000501177 ELOAQ14241 798 aaKnown RBP8.99□□□□□ -0.97
CRNDE-201ENST00000501177 VPS72Q15906 364 aa8.99□□□□□ -0.97
CRNDE-201ENST00000501177 WFDC8Q8IUA0 241 aa8.99□□□□□ -0.97
CRNDE-201ENST00000501177 TTC9Q92623 222 aa8.99□□□□□ -0.97
CRNDE-201ENST00000501177 DISP2A7MBM2 1401 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 TNS1Q9HBL0 1735 aaKnown RBP8.98□□□□□ -0.97
CRNDE-201ENST00000501177 TNFRSF10BO14763 440 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 H2AFB1P0C5Y9 115 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 H2AFB2P0C5Z0 115 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 KRT27Q7Z3Y8 459 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 DTWD1Q8N5C7 304 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 TP53INP1Q96A56 240 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 NSUN5Q96P11 429 aaKnown RBP8.98□□□□□ -0.97
CRNDE-201ENST00000501177 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.98□□□□□ -0.97
CRNDE-201ENST00000501177 RPGRIP1LQ68CZ1 1315 aa8.98□□□□□ -0.97
CRNDE-201ENST00000501177 TECPR2O15040 1411 aa8.97□□□□□ -0.97
CRNDE-201ENST00000501177 NRAPQ86VF7 1730 aa8.97□□□□□ -0.97
CRNDE-201ENST00000501177 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
CRNDE-201ENST00000501177 SPATA31A3Q5VYP0 1347 aa8.97□□□□□ -0.97
CRNDE-201ENST00000501177 IFT172Q9UG01 1749 aa8.97□□□□□ -0.97
CRNDE-201ENST00000501177 NAIPQ13075 1403 aa8.97□□□□□ -0.97
CRNDE-201ENST00000501177 TNS3Q68CZ2 1445 aa8.97□□□□□ -0.97
CRNDE-201ENST00000501177 LOC102724428A0A0B4J2F2 783 aa8.96□□□□□ -0.98
CRNDE-201ENST00000501177 NOS3P29474 1203 aa8.96□□□□□ -0.98
CRNDE-201ENST00000501177 SIK1P57059 783 aa8.96□□□□□ -0.98
CRNDE-201ENST00000501177 C16orf46Q6P387 395 aa8.96□□□□□ -0.98
CRNDE-201ENST00000501177 WFDC12Q8WWY7 111 aa8.96□□□□□ -0.98
CRNDE-201ENST00000501177 PLD4Q96BZ4 506 aa8.96□□□□□ -0.98
CRNDE-201ENST00000501177 IREB2P48200 963 aaKnown RBP8.95□□□□□ -0.98
CRNDE-201ENST00000501177 NAA30Q147X3 362 aaPredicted RBP8.95□□□□□ -0.98
CRNDE-201ENST00000501177 TMEM164Q5U3C3 297 aa8.95□□□□□ -0.98
CRNDE-201ENST00000501177 KRTAP4-8Q9BYQ9 185 aa8.95□□□□□ -0.98
CRNDE-201ENST00000501177 CXXC1Q9P0U4 656 aaPredicted RBP8.95□□□□□ -0.98
CRNDE-201ENST00000501177 ARHGEF10O15013 1369 aa8.95□□□□□ -0.98
CRNDE-201ENST00000501177 COL14A1Q05707 1796 aaKnown RBP8.94□□□□□ -0.98
CRNDE-201ENST00000501177 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
CRNDE-201ENST00000501177 DLL1O00548 723 aa8.94□□□□□ -0.98
CRNDE-201ENST00000501177 PSAPP07602 524 aa8.94□□□□□ -0.98
CRNDE-201ENST00000501177 HOXD8P13378 290 aaPredicted RBP8.94□□□□□ -0.98
CRNDE-201ENST00000501177 PARD3Q8TEW0 1356 aa8.94□□□□□ -0.98
CRNDE-201ENST00000501177 YY1P25490 414 aa8.93□□□□□ -0.98
CRNDE-201ENST00000501177 ARID4AP29374 1257 aaPredicted RBP8.93□□□□□ -0.98
CRNDE-201ENST00000501177 SOX18P35713 384 aa8.93□□□□□ -0.98
CRNDE-201ENST00000501177 XPCQ01831 940 aaPredicted RBP8.93□□□□□ -0.98
CRNDE-201ENST00000501177 COL13A1Q5TAT6 717 aaPredicted RBP8.93□□□□□ -0.98
CRNDE-201ENST00000501177 GDF6Q6KF10 455 aaPredicted RBP8.93□□□□□ -0.98
CRNDE-201ENST00000501177 MEGF10Q96KG7 1140 aa8.93□□□□□ -0.98
CRNDE-201ENST00000501177 CCDC9Q9Y3X0 531 aaKnown RBP8.93□□□□□ -0.98
CRNDE-201ENST00000501177 SBNO1A3KN83 1393 aa8.93□□□□□ -0.98
CRNDE-201ENST00000501177 RREB1Q92766 1687 aa8.93□□□□□ -0.98
CRNDE-201ENST00000501177 THSD7AQ9UPZ6 1657 aa8.93□□□□□ -0.98
CRNDE-201ENST00000501177 RGPD8O14715 1765 aaPredicted RBP8.93□□□□□ -0.98
CRNDE-201ENST00000501177 ATG7O95352 703 aa8.92□□□□□ -0.98
CRNDE-201ENST00000501177 BRD2P25440 801 aaKnown RBP8.92□□□□□ -0.98
CRNDE-201ENST00000501177 IGF2-ASQ6U949 168 aa8.92□□□□□ -0.98
CRNDE-201ENST00000501177 NLRP13Q86W25 1043 aa8.92□□□□□ -0.98
CRNDE-201ENST00000501177 COL26A1Q96A83 441 aa8.92□□□□□ -0.98
CRNDE-201ENST00000501177 TRIM33Q9UPN9 1127 aa8.92□□□□□ -0.98
CRNDE-201ENST00000501177 NRXN1Q9ULB1 1477 aa8.91□□□□□ -0.98
CRNDE-201ENST00000501177 LOC105371045A0A1W2PR82 267 aa8.91□□□□□ -0.98
CRNDE-201ENST00000501177 ZBTB39O15060 712 aa8.91□□□□□ -0.98
CRNDE-201ENST00000501177 R3HDM1Q15032 1099 aaKnown RBP8.91□□□□□ -0.98
CRNDE-201ENST00000501177 ARTNQ5T4W7 220 aa8.91□□□□□ -0.98
CRNDE-201ENST00000501177 KRT28Q7Z3Y7 464 aa8.91□□□□□ -0.98
CRNDE-201ENST00000501177 IL22RA1Q8N6P7 574 aa8.91□□□□□ -0.98
CRNDE-201ENST00000501177 NUP188Q5SRE5 1749 aa8.91□□□□□ -0.98
CRNDE-201ENST00000501177 RRBP1Q9P2E9 1410 aaKnown RBP8.9□□□□□ -0.98
CRNDE-201ENST00000501177 ABCC11Q96J66 1382 aa8.9□□□□□ -0.98
CRNDE-201ENST00000501177 NINLQ9Y2I6 1382 aa8.9□□□□□ -0.98
CRNDE-201ENST00000501177 ALX3O95076 343 aa8.9□□□□□ -0.98
CRNDE-201ENST00000501177 TRPM3Q9HCF6 1732 aaPredicted RBP8.89□□□□□ -0.99
CRNDE-201ENST00000501177 ALS2Q96Q42 1657 aa8.89□□□□□ -0.99
CRNDE-201ENST00000501177 GHRHP01286 108 aa8.89□□□□□ -0.99
CRNDE-201ENST00000501177 SETDB1Q15047 1291 aa8.89□□□□□ -0.99
CRNDE-201ENST00000501177 ADAMTSL4Q6UY14 1074 aa8.89□□□□□ -0.99
CRNDE-201ENST00000501177 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
CRNDE-201ENST00000501177 ZFP64Q9NPA5 681 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms